Pairwise Alignments

Query, 865 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 542 a.a., sensor histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  134 bits (338), Expect = 1e-35
 Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 19/312 (6%)

Query: 4   LSPPVPIPANDALRVDAVRRLGVLDTAAEAEFDDLAWLAAHISGSPMALISLLDADRQWF 63
           ++PP P    +A R+  +R LG++DT  +A FD +  LAA I  SP+ALISL+D DRQWF
Sbjct: 3   VAPPSPF---EAKRLQRLRELGIMDTLPDAAFDAITELAAQICESPIALISLVDEDRQWF 59

Query: 64  KARCGTDLEGTPRSVSFCSYTVM-GTDLLEVPDAIADPRFTHNPLVTAAPGIRSYVGVPL 122
           K+R G  +  T R  +FC++ ++   D++ V DA+ D RF  NPLVT  P IR Y G P+
Sbjct: 60  KSRVGLPVTQTAREFAFCAHAILQPEDVMLVEDALRDERFADNPLVTGEPNIRFYAGAPI 119

Query: 123 IGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLEARRDRLDAQAQRQTLSLLL 182
           +  +G A GT+C++   PR L   Q +AL  +A    + ++     LD+ + +       
Sbjct: 120 VTPDGLALGTVCVIDHVPRQLSARQIEALKAMATMVQSMIQHSDAVLDSMSNQADRWNRQ 179

Query: 183 EAMPDGVVACGTDGLLREFNHAARQWHGTDPRVLPPAQWA-QHFDLYAADGSTVLPTD-- 239
           + +   V A G D  L+ +      +   +   L    W      +       +LP    
Sbjct: 180 QTVMQAVGAAGID--LKAYIDKDHTYRYVNRSYLD--YWGLSRGQMTGLKVGELLPEGIY 235

Query: 240 ----AIPLVRAWRGEHVRNAELVIRATGQPPRSVLCN--ADPIDGDHGVALGAVCVMHDI 293
               A  L  A  G+ VR  E VI  +   PR V      D IDG     +G V  +HDI
Sbjct: 236 KSVVAPHLDHALTGQEVR-FETVIEFSRAGPRHVQVTYLPDCIDGT-DPPVGVVARIHDI 293

Query: 294 TQLKDASAALAA 305
             LK+    L A
Sbjct: 294 EDLKERERQLEA 305



 Score = 32.3 bits (72), Expect = 8e-05
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 206 RQWHGTDPRV-LPPAQWAQHFDLYAADGSTVLPTDAIPLVRAWRGEHVRNAELVIRATGQ 264
           RQW  +  RV LP  Q A+ F   A   + + P D + +  A R E   +  LV   TG+
Sbjct: 56  RQWFKS--RVGLPVTQTAREFAFCAH--AILQPEDVMLVEDALRDERFADNPLV---TGE 108

Query: 265 PPRSVLCNADPIDGDHGVALGAVCVMHDITQLKDAS--AALAAERARLQALVDAS 317
           P       A PI    G+ALG VCV+  + +   A    AL A    +Q+++  S
Sbjct: 109 PNIRFYAGA-PIVTPDGLALGTVCVIDHVPRQLSARQIEALKAMATMVQSMIQHS 162