Pairwise Alignments

Query, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score =  935 bits (2416), Expect = 0.0
 Identities = 484/805 (60%), Positives = 591/805 (73%), Gaps = 6/805 (0%)

Query: 12  NGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVV 71
           N TYDSS I VL+GL+AVRKRPGMYIGD  DG+GLHHMVFEVVDNS+DEALAGH DDI V
Sbjct: 4   NQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITV 63

Query: 72  KIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVS 131
            IH D S++V DNGRG+PVD+HKEEGVSAAEVI+TVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 64  IIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 123

Query: 132 VVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVEIFSDVEF 191
           VVNALSE L L + R G  ++Q Y  G PQ P+  +  S   GT + FKP+ E F ++ F
Sbjct: 124 VVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKNIHF 183

Query: 192 HYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPNVI 251
            +DILA+R+RELSFLNSGV I L DER  G+ + F YEGG+R+FVE+L   KTP++  V 
Sbjct: 184 SWDILAKRIRELSFLNSGVGILLKDERS-GKEEFFKYEGGLRAFVEYLNTNKTPVNSQVF 242

Query: 252 SVTGEHN-GIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQN 310
               + + G+ V+VALQW D++ E + CFTNNIPQ+DGGTHL GFR +LTR L++YIEQ 
Sbjct: 243 HFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQE 302

Query: 311 GIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEF 370
           G+AK+ K+  TGDD REG+ A++SVKVPDP FSSQTK+KLVSS+V+ AVE        +F
Sbjct: 303 GLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADF 362

Query: 371 LQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSEL 430
           L ENPNEAKA+ GK++DAARAREAARKAR++TRRKGALDIAGLPGKLADCQEKDPALSEL
Sbjct: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422

Query: 431 FIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGR 490
           ++VEGDSAGGSAKQGRNR+ QA+LPL+GKILNVE+ARFD+M++S +VGTLITALG GIGR
Sbjct: 423 YLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR 482

Query: 491 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQG 550
           +EYN DKLRYH II+MTDADVDGSHIRTLLLTFF+RQ+PEL+ERGYIYI  PPLYK+K+G
Sbjct: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKRG 542

Query: 551 KSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHR 610
           K E Y+KDD A+  Y+  SA+E A+L      P ++G  LE L+  F    + + R +  
Sbjct: 543 KQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSRL 602

Query: 611 YDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYH--LRFDPATDSA 668
           Y   L    + LP + + QL     +   L   QA LN        Y+  LR D   +  
Sbjct: 603 YPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKERNVW 662

Query: 669 AASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPITS 728
               V +  H G           F S + R +  +   L  L+ EGA + RG +   I  
Sbjct: 663 LPE-VEITSH-GLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVE 720

Query: 729 FAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFS 788
           F +   WL+ E  +   +QR+KGLGEMN +QLWETT++P  RR+L+V IEDA+AADQIF+
Sbjct: 721 FKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFN 780

Query: 789 TLMGDVVEPRRDFIEDNALKVSNLD 813
           TLMGD VEPRRDFIE NAL VSNLD
Sbjct: 781 TLMGDAVEPRRDFIESNALSVSNLD 805