Pairwise Alignments

Query, 1134 a.a., Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) from Xanthomonas campestris pv. campestris strain 8004

Subject, 1150 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas simiae WCS417

 Score =  392 bits (1006), Expect = e-112
 Identities = 335/1106 (30%), Positives = 504/1106 (45%), Gaps = 129/1106 (11%)

Query: 9    FRLYPSNALDTLAALLAEELRRPVPEQPVLQPEVVLIPQVAMRRWLQSTLAAEH------ 62
            F +   N LD L +L+   +RR  P  P L+ E+ L+    + +WL+  LA +       
Sbjct: 11   FMVVHGNRLDELRSLVVSWMRR-YPLAP-LENEIALVQSNGIAQWLKLALAEDPEDDDMG 68

Query: 63   --GVAANLEFLTPGEFVARALERNLG----PADDDLDMATTQWRLYQTLQGELGSDAALA 116
              G+AA ++   PG F+ +     LG    P    LD A   WRL + L  EL       
Sbjct: 69   GCGIAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLP-ELIDQPHFE 127

Query: 117  PLAGYLA-DGDALKPWALAGELGSVFEKYQAWRRDWLLRWESGAD--------------A 161
            PL  +L  D D  K + LA  L  +F++YQ +R DWL  W +G                A
Sbjct: 128  PLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNPA 187

Query: 162  DDPQARLWRSIA------GGRQYRARRIGQYLDRYARPDGPLPQGLPKRLFAFAILNVSP 215
            +  QA LWR++       G  + RA    ++++R    +   P+GLP R+  F I ++  
Sbjct: 188  NCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLE-KAPEGLPSRVIVFGISSLPA 246

Query: 216  DVLRVLATQARVGTLHFYLPTPTQGYWGDL---------QTLWQRRREGGAVALFAEQVQ 266
              L  LA  AR   +   +  P + +W D+         +   Q R+ G  V +  + + 
Sbjct: 247  QALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTIDPQTLH 306

Query: 267  EN--PLLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADPLDAGRRTLAEGGLGDSLLRRM 324
            ++  PLL AWG  GRD+++L+  Y+   P +  AA+ D    GR  L       +LL ++
Sbjct: 307  QHAHPLLAAWGKQGRDYISLLDSYD--DPNSYRAAFRD----GRIDLFSDSEPTTLLNQL 360

Query: 325  QSDLFH-RHAPAVPPVLPAVNLH-DPSLQVHACHTRLRELQVLHDQLRALLDDARFDPPL 382
            Q D+   R       + PAV+L  D S++ H  H+  RE+++LHDQL   L     DP L
Sbjct: 361  QDDILELRPLNETRELWPAVDLQRDTSIRFHIAHSAQREVEILHDQL---LQRFSADPSL 417

Query: 383  QPREIAVLSPDIDPYVPYLDAVFGGHGSDDG--LPYALADASPLASEPLADVFLTLLGLP 440
            +PR++ V+ PD+D Y P++ AVFG    +D   +P+ L D      +PL      LL LP
Sbjct: 418  RPRDVIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLP 477

Query: 441  ISRFGLHEILDLLASAPIAEAAGLDEAGLERLRGWLHGAGARWGLDAVHRRQHQAPGD-D 499
             SRF + EILDLL    + E   + E  L  L  W+ GAG RWGL+A  R     P + +
Sbjct: 478  DSRFPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPKELE 537

Query: 500  AYTWRFALDRLLLGHASGAEDDIDGVAPWPQLEGSALAALDTLLRLLRVLDRHQAALAEA 559
              +WRF L R+LLG+A G     DG+ P+ ++ G   A +  L+ LL  L     AL+  
Sbjct: 538  QNSWRFGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSLP 597

Query: 560  MTPVQWRECLLGLLEALIPAAPSAPRAQRALERLRTLIDQFARDAVRAEYAGNVPAEVVR 619
             +P QW E L  L++      PS+      L +L  L + +            +P  VVR
Sbjct: 598  ASPTQWGERLQRLIQLFF--LPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVR 655

Query: 620  AHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRLT 679
              + A L +       L G ++F  ++PMR +PF+ ICLLGMNDGD+PR  P    + + 
Sbjct: 656  EAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLICLLGMNDGDYPRAQPPLDFDLMG 715

Query: 680  AELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGADARDGTVREPSVLVSELLG 739
            ++      R GDRS REDDR+L L+   SA++  Y+S++G   RD + R  SVL+ +L  
Sbjct: 716  SDY-----RPGDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLRD 770

Query: 740  SAAQ----YHADPKAIDALVVRHPLQPFAAAAFGAVGEDGADPRRFSYRRQWRPAVDSLA 795
              A      ++D   I+A+   HPLQPF+A  F     +G     FSY R+W+       
Sbjct: 771  HLASGWHLANSDKPLIEAMTQEHPLQPFSARYF----HEG--DALFSYAREWQ------- 817

Query: 796  GQRQPLAPWVAGALPADASVLP----ASVSIDDLRRLFADPAGQFLRHRLGMRLPDPAGE 851
                 L    + ALP +  + P      +S+  L+    +P   F   RL +        
Sbjct: 818  -----LLHEASDALPTEHDLAPHQQEEPLSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVP 872

Query: 852  DSDLEPLLAPTRGLEQYGLQQQVFEAALAGDADGLYERLRARA-------LLPSGPLG-- 902
             +D EP +     L++Y L   +  AAL    D L + L A+A       LLP    G  
Sbjct: 873  LADEEPFVLD--ALQRYSLSDSLLNAALT-RPDQLDQTLNAQALRLQGSGLLPMVGFGEC 929

Query: 903  -RRQLDERLRQ-LRPYADVFRQW----RGEAPAQSQRLQVEIDG--TNVHGRVPG----- 949
             R +L E L   LR Y  +   W     G  P   +   V+++G  + +H R  G     
Sbjct: 930  LRNELIEPLPDLLRRYQQLLALWPTPHTGAEPVSFEHHGVQLEGWISGLHRRSDGGLLSV 989

Query: 950  -WYANGVGRVQVGALSGRSAIRDGLEWLLLRAAGERVPFVRFFEHDDSLGPHPIDPEPLS 1008
                N +G ++         IR  +  ++  A G  +        D  L P      PL 
Sbjct: 990  TTIPNSIGSIK--TRKWHRLIRPWVNHVVACACGLPLSTGLVASDDTLLLP------PLD 1041

Query: 1009 QTQARAALGELLQLYRQGLQTPLAFA 1034
            +  A+  LG LL  +  G+  PL  A
Sbjct: 1042 KANAQEVLGHLLLAWHAGMSKPLPVA 1067