Pairwise Alignments

Query, 745 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Xanthomonas campestris pv. campestris strain 8004

Subject, 689 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas simiae WCS417

 Score =  273 bits (699), Expect = 2e-77
 Identities = 252/751 (33%), Positives = 319/751 (42%), Gaps = 140/751 (18%)

Query: 14  GALRTLDLAFAQSLQRLAPDTDPQVLAGAALASLAVTSGHAGLD--------------PT 59
           G LR LD AF   L  L P  DP VL  AAL S  +  GH  LD              P 
Sbjct: 31  GWLRALDKAFVGFLHELDPQADPLVLLAAALTSHQLGHGHVCLDLFETLKAPDFALSLPP 90

Query: 60  RAAMLLDAREGPSPALP--DPTDWQRTLAASRWVDQPNPQEPAAADCPLVLEHGLLYLRR 117
              +   A   PS  L   D   W   LAAS  V        +A   PLVL    LYLRR
Sbjct: 91  EGDLQTGAMLLPSQLLDGLDGAHWCHALAASHLVALAVDGRESAQSRPLVLSGKRLYLRR 150

Query: 118 YREYERRLALGLQ-RIAAHSPPPFAAATLAPLFEQLFPQASPLPQGEGARRAGEGTGLPE 176
           Y  YERR+   L+ R+A        AA L      LF Q                     
Sbjct: 151 YWTYERRIDTALRLRLATQES---VAADLPQRLNSLFDQ--------------------- 186

Query: 177 PSIYQDGTNPPEPSHHQDHQAQAAALALRRTLLLVTGGPGTGKTTTIARLLLLRIAQAHA 236
                     P P    D Q  A ALA R    +VTGGPGTGKTTT+ RLL L  A A  
Sbjct: 187 ----------PPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVE 236

Query: 237 SNTPAPRIALAAPTGRAAERMAESLRAAVARAIANGIDPALADALPTGASTLHRLLGVIP 296
             +P  RI LAAPTG+AA R+ ES+   V   ++  +  ++ + +PT  +T+HRLLG  P
Sbjct: 237 VGSPL-RIRLAAPTGKAAARLTESISQQV---LSLKVPDSVKEKIPTQVTTVHRLLGSRP 292

Query: 297 DSPQFRHTADNPLPFDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQLPSVEAGD 356
            +  FRH   NPLP D++VVDEASM+DL +M  L++A+    +L+LLGD DQL SVEAG 
Sbjct: 293 GTRHFRHHIGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGA 352

Query: 357 VLAAILQAAGPGDTLQPQDADALQPLLGSAPPGSTPASIQTGGHTISHTHTGGLAGHRVH 416
           VL  + + A  G     +    LQ + G     S       G H         LA   V 
Sbjct: 353 VLGDLCRDAEAG-FYSAETRQWLQAVSGEDLSASGLQEDLDGSHP--------LAQQVVM 403

Query: 417 LLRGYRQADNFALTPLADAIRTSDADTALALLRSG--------ELAGVHFHE------DG 462
           L    R  +   +  LA  +   + + A  L  +          L G H H       DG
Sbjct: 404 LRYSRRFGEGSGIGQLARWVNQQNPEEARKLFAARSHDDLFCVSLKGEHDHALERLVLDG 463

Query: 463 EDPLALG-----------RDALLAHWRALADAHDPAAALRDAARLRLLTAVRAGPQGARG 511
           +   A G           R +      + A  H     L+     +LL AVR GP G  G
Sbjct: 464 QGEGAEGYRYYLNLLQSARPSPETPRESDAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEG 523

Query: 512 LNARIEQLLAESGSGARRLGSASPWFQGRLLLITENSYRHGLFNGDVGICLRSEASPFSE 571
           LN RI   L +     R +     W++GR +L+T N Y  GL NGD+GI L+   S    
Sbjct: 524 LNLRITAALRK----VRLIDGDEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPES---- 575

Query: 572 RSDTNAPSERSDASTVTARSDAAASSGPSHSIGTANRADPVAERRAQGPLVAWFEGDGDS 631
                                     GP                  Q   VA+   DG  
Sbjct: 576 ------------------------DGGP------------------QVLRVAFPRNDGQG 593

Query: 632 QVRGFHPAALPAHESAFAMTVHKAQGSEFDTVWLQLPTRDARVLSRELLYTGITRARRAL 691
            VR   P+ L   E+ +AMTVHK+QGSEF    L LP   + VL++EL+YTGITRA+R  
Sbjct: 594 GVRFVLPSRLNDVETVYAMTVHKSQGSEFTHTALILPDALSPVLTKELIYTGITRAKRWF 653

Query: 692 HLAGSEAAL-RAALARHAARISGLAWRLGGE 721
            L      +   A+ R   R+SGL   LG E
Sbjct: 654 SLIEPRGGVFEEAVRRKVKRLSGLMLELGHE 684