Pairwise Alignments

Query, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score =  951 bits (2458), Expect = 0.0
 Identities = 527/940 (56%), Positives = 648/940 (68%), Gaps = 46/940 (4%)

Query: 4   LVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERP-AYVAFVVDAPGKT 62
           LVL+DGSSYLYRAFHALPPLT ++G PTGA+ GV+NML++  K+ P +  A V DA G T
Sbjct: 6   LVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFDAKGGT 65

Query: 63  FRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGASD 122
           FRD ++A+YKANRPSMPDDLR Q++P+   V ALG  +L ++GVEADDVIGTLA   A+ 
Sbjct: 66  FRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLARSSAAL 125

Query: 123 GLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGDTV 182
           G  V ISTGDKD AQLV   + LVNTM+GS +D    V  KFGV P  I+D LALMGD V
Sbjct: 126 GRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDV-AGVHEKFGVGPEHIIDFLALMGDKV 184

Query: 183 DNVPGVEKCGPKTAAKWLAE--------YDSLDGV----IANADKIKGKIGENLRAALPR 230
           DN+PGV   G KTA   L          Y +LD V    I  A  +  K+ E+  AA   
Sbjct: 185 DNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDAAF-- 242

Query: 231 LPLNRELVTIKTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLT 290
             L+ EL TIK DV L     AL   EP+ EAL  LY    F   + EL   AA+AG   
Sbjct: 243 --LSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDV 300

Query: 291 APMAVARTEPGRARGTGFVSAPAAAPVELDPALSAPGQYETILTQAQLDSWIARLRAAGQ 350
           AP                          ++PA+    +YETIL QA+ D+W+ +LR A  
Sbjct: 301 APA-------------------------VEPAVKVEAKYETILDQARFDAWLEKLRQAPL 335

Query: 351 FAFDTETDSLDALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAPLLTD 410
           FAFDTET  LDA QA L+GLS A EP +AAY+P  HD+ GAP QLDR   L  L PLL D
Sbjct: 336 FAFDTETTGLDAQQAQLVGLSFAVEPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLED 395

Query: 411 PAVRKLGQHGKYDLHVMRRHG--IALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYD 468
           PA  K+GQ+ KYD++++      I + G A DT+LES+VLNS + RHDMDSLA++YL + 
Sbjct: 396 PAKAKVGQNAKYDINILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHT 455

Query: 469 TVKYEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYRDI 528
           T+ +EDI GKGAKQ+ F Q++L+ A  YAAEDADITLRLH  L  RLA  P+++ V  DI
Sbjct: 456 TIAFEDIAGKGAKQLTFNQINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDI 515

Query: 529 EMPLVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQAL 588
           EMPLV VL RIE  G  VDA  L+ QS +L  +M   + +A ELAG TFNL SPKQL  +
Sbjct: 516 EMPLVPVLARIERQGALVDAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTI 575

Query: 589 LFDELKLPAVVKTPKGQPSTNEEALEAIADQ-HELPRVILDYRSLAKLRSTYTDKLPEMI 647
           L+D+L +P + KT KGQPST E  L+ +A Q + LP V++ YRSL+KL+STYTDKLP  I
Sbjct: 576 LYDKLGMPVLSKTAKGQPSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQI 635

Query: 648 HPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQ 707
           +P++GR+HTSY QA AATGRLSSSDPNLQNIPIRT +GRRIR+AF+A  G KL+A DYSQ
Sbjct: 636 NPRTGRIHTSYQQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQ 695

Query: 708 IELRIMAHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGM 767
           IELRIMAHL+ D GL+ AF +  DVHRATAAEVFG  ++ V+ D+RR+AKAINFGL+YGM
Sbjct: 696 IELRIMAHLAKDEGLLHAFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGM 755

Query: 768 SAFGLARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFI 827
           SAFGLA+Q+G+ R ++QDYI  YF+RYPGV  +ME TR QA ++G+VET+FGRRLYL  I
Sbjct: 756 SAFGLAKQIGVDRKQSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDI 815

Query: 828 NAGSQGQRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEA 887
           NA +   R GAER AINAPMQGTAADIIKRAMV VD W+++    A +ILQVHDELV E 
Sbjct: 816 NAKNPALRKGAERTAINAPMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEV 875

Query: 888 DADFVDTLLAEVTARMSAAASLRVPLVVDSGVGDNWDEAH 927
             D V  +  E+   MS AA L VPL+V++GVG NWDEAH
Sbjct: 876 REDLVQQVKDEIRQHMSQAAQLDVPLLVEAGVGANWDEAH 915