Pairwise Alignments

Query, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  834 bits (2155), Expect = 0.0
 Identities = 467/942 (49%), Positives = 606/942 (64%), Gaps = 31/942 (3%)

Query: 5   VLIDGSSYLYRAFHA-----LPPLTNAQGEPTGALFGVVNMLRATLKE-RPAYVAFVVDA 58
           +L+DGSSYLYRAF A        L +     TGA+  ++NM++   K+ R  Y A V DA
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQKLRKDVRADYAACVFDA 60

Query: 59  PGKTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQ 118
            G TFRD LY +YKANR  MPDDLRAQ+ P+ ++V  LG  +L + GVEADDVIGTLA  
Sbjct: 61  KGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTLAHL 120

Query: 119 GASDGLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALM 178
            A  G+   IS+GDKD +QLV   + +++TM+  R D    V A+FGV P+ ++D   L+
Sbjct: 121 AAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDV-AGVTAEFGVPPSLMLDYQTLV 179

Query: 179 GDTVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRELV 238
           GD VDNVPGV K GPKTA KWL EY SL+ ++A A +IKG  GENLR AL  LP  REL+
Sbjct: 180 GDQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARAGEIKGAAGENLRNALDWLPKGRELL 239

Query: 239 TIKTDVVLAS------GPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLTAP 292
           TIK D  L           A+ +   ++EAL      YGF   ++ L             
Sbjct: 240 TIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSL---------TQHD 290

Query: 293 MAVARTEPGRARGTGFVSAPAAAPVELD-PALSAPGQ------YETILTQAQLDSWIARL 345
           +   R E  + +      A   +P   D P LS   +      Y+T+LT  Q DSW+ RL
Sbjct: 291 VPPERIEESKVKAAAKGKAGDGSPGLFDEPDLSGSAERTTNLRYDTLLTWDQFDSWLQRL 350

Query: 346 RAAGQFAFDTETDSLDALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLA 405
           +AA   A DTET SLD ++A ++G+S +  PG+AAY+P  H  P AP QL   + LA+L 
Sbjct: 351 QAAELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKLK 410

Query: 406 PLLTDPAVRKLGQHGKYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYL 465
           P L DPA  KLGQH KYD HV   HGI + GY  DT+L+S+VL      H + SLA+R+L
Sbjct: 411 PWLEDPAKHKLGQHMKYDRHVFANHGIEVQGYVHDTMLQSYVLEVHKP-HGLASLAERHL 469

Query: 466 GYDTVKYEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVY 525
           G   + YED+CGKGA QI FAQV +  A  Y+ ED+D TL +H+VL  +L A+  L  +Y
Sbjct: 470 GRQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQADEKLRFIY 529

Query: 526 RDIEMPLVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQL 585
            ++E+     L RIE NGV +DA  L  QS +L +R++A +Q+A  +AG+ FNL SPKQL
Sbjct: 530 -ELEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQPFNLGSPKQL 588

Query: 586 QALLFDELKLPAVVKTPKGQPSTNEEALEAIADQHELPRVILDYRSLAKLRSTYTDKLPE 645
             + FD+L LP + KT  G  ST+EE LE +A+ + LP  IL++RSLAKL+ TYTDKL +
Sbjct: 589 GEIFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLAKLKGTYTDKLAQ 648

Query: 646 MIHPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDY 705
           +  P++GRVHT Y QA A TGRLSS+DPNLQNIPIRT +GRR+R AFVAPAG  + + DY
Sbjct: 649 LALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSVIASADY 708

Query: 706 SQIELRIMAHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMY 765
           SQIELRIMAH+SGD  L+ AF  G DVHRATAAEVFG     VS ++RR AK INFGL+Y
Sbjct: 709 SQIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRYAKVINFGLIY 768

Query: 766 GMSAFGLARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLD 825
           GM +FGLA+ LGI    A++YI  YF R+ GV+ +M+ TRQ+A+D GY+ETVFGRRL L 
Sbjct: 769 GMGSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIETVFGRRLVLP 828

Query: 826 FINAGSQGQRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVF 885
            I      + +  ER AINAPMQGTAAD+IK +MV+V   + +  +   MI+QVHDELVF
Sbjct: 829 DIKNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDEQRRSTKMIMQVHDELVF 888

Query: 886 EADADFVDTLLAEVTARMSAAASLRVPLVVDSGVGDNWDEAH 927
           E     VD L  E+   M+  A+L+VPL+ + GVG NWD+AH
Sbjct: 889 EVPEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930