Pairwise Alignments

Query, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

Subject, 928 a.a., 5 from Escherichia coli BL21

 Score =  931 bits (2406), Expect = 0.0
 Identities = 500/941 (53%), Positives = 646/941 (68%), Gaps = 38/941 (4%)

Query: 4   LVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKE-RPAYVAFVVDAPGKT 62
           L+L+DGSSYLYRA+HA PPLTN+ GEPTGA++GV+NMLR+ + + +P + A V DA GKT
Sbjct: 9   LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68

Query: 63  FRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGASD 122
           FRD+L+  YK++RP MPDDLRAQ++P+  +V A+G+ +L + GVEADDVIGTLA +    
Sbjct: 69  FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128

Query: 123 GLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGDTV 182
           G  V ISTGDKD AQLV P + L+NTM+ + +  +E V+ K+GV P  I+D LALMGD+ 
Sbjct: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEE-VVNKYGVPPELIIDFLALMGDSS 187

Query: 183 DNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRE------ 236
           DN+PGV   G KTA   L     LD + A  +KI G      +    +L  N+E      
Sbjct: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247

Query: 237 -LVTIKTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLTAPMAV 295
            L TIKTDV L      L++++P AE L  L+ +Y F +   ++     EAG        
Sbjct: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV-----EAGKWL----- 297

Query: 296 ARTEPGRARGTGFVSAPAAAPVELDPALSAP---------GQYETILTQAQLDSWIARLR 346
                 +A+G    + PAA P E   A  AP           Y TIL +  L +WIA+L 
Sbjct: 298 ------QAKG----AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347

Query: 347 AAGQFAFDTETDSLDALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAP 406
            A  FAFDTETDSLD + ANL+GLS A EPG AAY+P  HD+  AP Q+ R +AL  L P
Sbjct: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407

Query: 407 LLTDPAVRKLGQHGKYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLG 466
           LL D    K+GQ+ KYD  ++  +GI L G A DT+LES++LNS + RHDMDSLA+R+L 
Sbjct: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467

Query: 467 YDTVKYEDICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYR 526
           + T+ +E+I GKG  Q+ F Q++LE+A RYAAEDAD+TL+LH  +   L       +V+ 
Sbjct: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527

Query: 527 DIEMPLVGVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQ 586
           +IEMPLV VL RIE NGV +D   L   S +L+ R+   ++KA E+AG  FNL S KQLQ
Sbjct: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587

Query: 587 ALLFDELKLPAVVKTPKGQPSTNEEALEAIADQHELPRVILDYRSLAKLRSTYTDKLPEM 646
            +LF++  +  + KTP G PST+EE LE +A  + LP+VIL+YR LAKL+STYTDKLP M
Sbjct: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647

Query: 647 IHPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYS 706
           I+P++GRVHTSYHQA  ATGRLSS+DPNLQNIP+R E+GRRIR+AF+AP    +++ DYS
Sbjct: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYS 707

Query: 707 QIELRIMAHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYG 766
           QIELRIMAHLS D GL+ AF  G D+HRATAAEVFG  ++TV+ ++RR+AKAINFGL+YG
Sbjct: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767

Query: 767 MSAFGLARQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDF 826
           MSAFGLARQL I R EAQ Y+ LYF RYPGV ++ME TR QA+++GYVET+ GRRLYL  
Sbjct: 768 MSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD 827

Query: 827 INAGSQGQRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFE 886
           I + +  +RA AERAAINAPMQGTAADIIKRAM++VD W+     R  MI+QVHDELVFE
Sbjct: 828 IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 887

Query: 887 ADADFVDTLLAEVTARMSAAASLRVPLVVDSGVGDNWDEAH 927
              D VD +  ++   M     L VPL+V+ G G+NWD+AH
Sbjct: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928