Pairwise Alignments

Query, 589 a.a., ATP-dependent RNA helicase RhlB from Xanthomonas campestris pv. campestris strain 8004

Subject, 495 a.a., ATP-dependent helicase from Ralstonia solanacearum PSI07

 Score =  310 bits (793), Expect = 1e-88
 Identities = 191/449 (42%), Positives = 258/449 (57%), Gaps = 27/449 (6%)

Query: 16  IMSDKPLTD-LTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTG 74
           I S+ P  + +TF +F LHP ++  L  +G+TR TPIQA  +PV + G DV G AQTGTG
Sbjct: 5   ITSEAPANESVTFDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTG 64

Query: 75  KTLAFLVAVMNRLLIRPALADRKPEDP-RALILAPTRELAIQIHKDAVKFGADLGLRFAL 133
           KT  F + ++  LL     +      P RALIL PTRELA Q++ +  K+G    LR A+
Sbjct: 65  KTAGFSLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVYDNVAKYGKYTALRSAV 124

Query: 134 VYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFI 193
           V+GGVD + Q E L++GV++++ATPGRL+D+V+Q  V +L    + VLDEADRM D+GF+
Sbjct: 125 VFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSV-NLSQVRMLVLDEADRMLDMGFL 183

Query: 194 KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIY 253
            D++ ++  +P    RQTLLFSAT S  + +LA  ++  P+ + V     TA  VRQ IY
Sbjct: 184 PDLQRIINLLPAH--RQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVIY 241

Query: 254 FPSDEEKQTLLLGLL-SRSEG---ARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQ 309
              D  KQ  L+ LL  R+E    ++ +VF N+K    R+AR LER G     + GD  Q
Sbjct: 242 TVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQ 301

Query: 310 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 369
            +R   L  F++G +++LVATDVAARGL I  +  V N+DLPF+AEDYVHRIGRT R G 
Sbjct: 302 TERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGA 361

Query: 370 EGDAISFACERYAMSLPDIEAYIEQKIPVEPVTTELLTPLPRTPRATVEGEEVDDDAGDS 429
            GDA+S         L DIE  I++ +P      E LT    T     E E         
Sbjct: 362 SGDALSLFAPGDERLLADIEKLIKRNLP-----RETLTDFDPTGEQARERER-------- 408

Query: 430 VGTIFREAREQRAADEARRGGGRSGPGGA 458
                RE  E+R   E RR   R    GA
Sbjct: 409 -----RERDERRNRTEIRRSRERDERNGA 432