Pairwise Alignments

Query, 702 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Xanthomonas campestris pv. campestris strain 8004

Subject, 739 a.a., primosome assembly protein from Pseudomonas putida KT2440

 Score =  552 bits (1422), Expect = e-161
 Identities = 319/670 (47%), Positives = 406/670 (60%), Gaps = 39/670 (5%)

Query: 8   LRVALPVPLPQLFDY-LPLQDTDVDGPDRVGCRVRVPFGPRELIGVVVERGQQPS--AEG 64
           LR+ALP PL +LFDY  P     +      G R+RVPFG RE+IGV++E   Q    A+ 
Sbjct: 6   LRLALPSPLRRLFDYKAPASMARLTLTP--GMRIRVPFGRREMIGVLIEVCTQSEVPADK 63

Query: 65  LRAALDWCDDTPLLIDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHAWAWQ 124
           L+ A    D    +   L +   W A+Y    LG+  + ALP  LR+GE         W 
Sbjct: 64  LKPASALLDPVSPIPASLFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEAAEMRQERFWH 123

Query: 125 LTEAGHTGAGSLRAGSRP----------------ALLAALLLAGPLAEEPLEQQLPQWRE 168
           +          +    R                 +LLA L L     +  L + L Q  E
Sbjct: 124 IAPGARLEDPRIARAPRQRDALKTLAQHPHGVAHSLLAKLNLNKDSLDLLLAKDLVQI-E 182

Query: 169 AARNLAKRGYAERVAVAADTLPARPGTGPQLNDEQQAATDAIRAG-SGFATYLLDGVTGS 227
             R+L    +   +A      P  P     LN+EQ+ A DA+  G  GF  +LL GVTGS
Sbjct: 183 TRRHLPALRHEHWLAQ-----PELP-----LNEEQREAFDAVCEGFGGFGAFLLAGVTGS 232

Query: 228 GKTEVYLQAIADCLAAGKQALVLVPEIGLTPQTLGRFRERLGVPVHALHSGLSDGERARV 287
           GKTEVYLQ I + L AGKQALVL+PEI L PQTL RF +R    +  LHS ++D ER   
Sbjct: 233 GKTEVYLQLIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDA 292

Query: 288 WAAAWRGEAKLIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKAL 347
           W AA  GEA +I+GTRSA+FTP+ N GLI+IDEEHDGSYKQQ+G+RYHARD ALVR    
Sbjct: 293 WLAARDGEADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQE 352

Query: 348 DVPVILGSATPSLESLHNAYSGRYRHLRLSRRAGDARPPRVRVLDVRKRPLKDGLSPEVL 407
           ++P++LGSATPSLE+LHNA +GRYR LR+++RAG ARPPR+  LDV+  PL  G+S  + 
Sbjct: 353 NIPILLGSATPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQ 412

Query: 408 AGIGATLARGEQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQC 467
             I  TL  G+QVLVF NRRG+AP LLCHDCGW + C RC        MTVH     L+C
Sbjct: 413 QAIRQTLEAGQQVLVFLNRRGFAPTLLCHDCGWLSECPRC-----DARMTVHQRSGVLRC 467

Query: 468 HHCGARQPAPLACPACASLALQPQGIGTERLEERLVEAFPEAPVVRIDRSTTQRRDALET 527
           HHCG  +  P  CP C  + L+P G GTER EERL   FP+ P++R+DR +T R+DA+  
Sbjct: 468 HHCGYDERLPHQCPQCNHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHN 527

Query: 528 QLARLGT-DAGILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAG 586
             + +      ILVGTQ+LAKGH  PR+T+V ++  D GLFS DFRA+E++AQ ++QVAG
Sbjct: 528 LFSTIQRGQPSILVGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAG 587

Query: 587 RAGRADRPGEVWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEA 646
           RAGRA+ PG+V +QTH  +HPLL  L   GY AFA+  L +R AAG PP++HLAL RAEA
Sbjct: 588 RAGRAEEPGKVIIQTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEA 647

Query: 647 KDVAAANQFL 656
                A  FL
Sbjct: 648 HKPGQAEGFL 657