Pairwise Alignments

Query, 702 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Xanthomonas campestris pv. campestris strain 8004

Subject, 732 a.a., Primosome factor n from Escherichia coli BL21

 Score =  564 bits (1453), Expect = e-165
 Identities = 320/667 (47%), Positives = 414/667 (62%), Gaps = 25/667 (3%)

Query: 10  VALPVPLPQLFDYLPLQDTDVDGPDRVGCRVRVPFGPR-ELIGVVV---ERGQQPSAEGL 65
           VALPVPLP+ FDYL  +   V    + GCRVRVPFG + E IG+VV   +  + P  E L
Sbjct: 6   VALPVPLPRTFDYLLPEGMTV----KAGCRVRVPFGKQQERIGIVVSVSDASELPLNE-L 60

Query: 66  RAALDWCDDTPLLIDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHAWAWQL 125
           +A ++  D  P+    + R L W A Y H P+G+    ALP  LR+G P A+   W W  
Sbjct: 61  KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120

Query: 126 TEAGHT-GAGSLRAGSRPALLAALLLAGPLAEEPLEQQLPQWREAA-RNLAKRGYAERVA 183
           TE G      SL+   +     A L  G +  + +     ++ +AA + L K+G  +  +
Sbjct: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL--EFNDAALQALRKKGLCDLAS 178

Query: 184 VAAD-----TLPARPGTGPQLNDEQQAATDAIR-AGSGFATYLLDGVTGSGKTEVYLQAI 237
              +     T  A  G   +LN EQ  A  AI  A   F+ +LL GVTGSGKTEVYL  +
Sbjct: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238

Query: 238 ADCLAAGKQALVLVPEIGLTPQTLGRFRERLGVPVHALHSGLSDGERARVWAAAWRGEAK 297
            + LA GKQALV+VPEIGLTPQT+ RFRER   PV  LHSGL+D ER   W  A  GEA 
Sbjct: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298

Query: 298 LIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSAT 357
           +++GTRSA+FTP  N G+IVIDEEHD SYKQQ+G RYHARD A+ R  +  +P+ILGSAT
Sbjct: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358

Query: 358 PSLESLHNAYSGRYRHLRLSRRAGDARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARG 417
           P+LE+L N    +YR LRL+RRAG+ARP    VLD++ + ++ GL+P ++  +   L   
Sbjct: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418

Query: 418 EQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQPAP 477
            QV++F NRRG+AP LLCHDCGW A C RC    H    T+H     L+CHHC +++P P
Sbjct: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCD---HY--YTLHQAQHHLRCHHCDSQRPVP 473

Query: 478 LACPACASLALQPQGIGTERLEERLVEAFPEAPVVRIDRSTTQRRDALETQLARLGT-DA 536
             CP+C S  L P G+GTE+LE+ L   FP  P+ RIDR TT R+ ALE QLA +    A
Sbjct: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533

Query: 537 GILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAGRAGRADRPGE 596
            IL+GTQ+LAKGH  P +T+V ++ +D  LFSADFR+AE+ AQ   QVAGRAGRA + GE
Sbjct: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593

Query: 597 VWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFL 656
           V LQTHHPEHPLLQTL+  GY AFA+  L +R     PP+    + RAE  +   A  FL
Sbjct: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653

Query: 657 IAVRALV 663
             +R L+
Sbjct: 654 QQLRNLI 660