Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  207 bits (527), Expect = 6e-58
 Identities = 141/441 (31%), Positives = 213/441 (48%), Gaps = 19/441 (4%)

Query: 24  LALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGT------SLLWLPMLVPIGTLIS 77
           L+ PL+   ++  L+   D ++        LA   +G       S+  + ++  +GTL++
Sbjct: 17  LSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVGTLVA 76

Query: 78  LTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLT-AVPPLLPTFGIAPDIVPGA 136
           +      + GA R  + G      LWL+  L AL  G L   + PLL  FG     V  A
Sbjct: 77  IRHGAGDIEGATRLTQAG------LWLAW-LMALAAGLLLWNLKPLLLLFGQTETNVHSA 129

Query: 137 TDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVLAPLGYVLTYGKFGFAE 196
             FL  + +  P    +  +R  +  +    P M++  GG +    L + L  G FG  +
Sbjct: 130 GQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFGLPK 189

Query: 197 HGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLEGPRWRAIGELLRTGLPIGI 256
            G  G+G+ +A+     A+A   Y+ R+R +A   L T L     + + EL R GLPIG 
Sbjct: 190 LGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLPIGG 249

Query: 257 TVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGVAEATTVRVGHAVGRGD 316
           T  +E GLF   AL +G +GST+ AAHQIA+ +  + FM+P G++ A T+R+G   G G 
Sbjct: 250 TYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQHYGAGQ 309

Query: 317 PLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYT--NDAA---VAALASVLLLFAA 371
            L  R A   G           A++L L  D ++G+    ND A   V  LA  LL  AA
Sbjct: 310 LLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSLLAVAA 369

Query: 372 TFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLGLGLGWGPQGMWIGLI 431
            F+  DG+Q ++ G +RGLKD +    +    YW +G P    +   LGWGP G+W GL 
Sbjct: 370 WFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGPTGVWWGLA 429

Query: 432 LGLTAAAILMGLRFRQTSRRL 452
           LGL  AA+ +   F    +R+
Sbjct: 430 LGLACAAVSLTWAFEAKMKRM 450



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 39/177 (22%), Positives = 62/177 (35%), Gaps = 22/177 (12%)

Query: 236 LEGPRWRAIGELLRTGLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFM 295
           ++ P    +  +LR   P+  + L    + +   L++ RL     A   +         +
Sbjct: 3   MQHPARTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSI 62

Query: 296 IPMGVAEATTVRVGHAVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTN 355
             +GV  A    V    G GD  G  R   AG  +     A++A +LL            
Sbjct: 63  FCIGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLA-WLMALAAGLLLWN---------- 111

Query: 356 DAAVAALASVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLG 412
                 L  +LLLF  T        V SAG    +    +P FL+  +  G    +G
Sbjct: 112 ------LKPLLLLFGQT-----ETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIG 157