Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  356 bits (914), Expect = e-103
 Identities = 193/452 (42%), Positives = 276/452 (61%), Gaps = 7/452 (1%)

Query: 6   SSPSATP-RFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLL 64
           ++P   P R + EVR    LALP+++G ++T  + FVD V+AG      LAAV +G S+ 
Sbjct: 5   TAPLTRPARISREVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSI- 63

Query: 65  WLPM-LVPIGTLISLTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLL 123
           W+P+ L+  GTL++ T  V+Q  GAG+  EIGPL RQ+LWL++ +G      L    P+L
Sbjct: 64  WIPVYLLMTGTLLATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPIL 123

Query: 124 PTFGIAPDIVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVLAPL 183
               + PD++  +  +LH +  G PA+  Y+ +R  S+G+  T P+M++G  GL +  PL
Sbjct: 124 HVMNVEPDLIEPSMGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPL 183

Query: 184 GYVLTYGKFGFAEHGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLEGPRWRA 243
            Y+  YG  G    G  G G A+AI MWV  +  A++      +   EL+   + P+W  
Sbjct: 184 NYIFIYGHLGVPAMGGVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAV 243

Query: 244 IGELLRTGLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGVAEA 303
           I  +L  GLPIGI +  E  +F V ALLIG LG+T  + HQIA+NVS L FMIP  ++ A
Sbjct: 244 IKRVLSIGLPIGIAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMA 303

Query: 304 TTVRVGHAVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTNDAAVAALA 363
            TVRVG A+GRG+P   R AA  G    L    +S S++LL  + I  +YT D  V  LA
Sbjct: 304 VTVRVGQALGRGEPREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLA 363

Query: 364 SVLLLFAATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLG----LGL 419
           S+L++F+A FQF D IQV +AGALRG +DTRV M L +F+YWG+G+P+G  LG    LG 
Sbjct: 364 SMLIVFSALFQFSDSIQVTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGE 423

Query: 420 GWGPQGMWIGLILGLTAAAILMGLRFRQTSRR 451
             GP G+W GLI+GL+ AA ++ +R  +++RR
Sbjct: 424 PSGPSGLWQGLIVGLSCAAGMLLVRLARSARR 455