Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 457 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  284 bits (726), Expect = 5e-81
 Identities = 170/448 (37%), Positives = 245/448 (54%), Gaps = 7/448 (1%)

Query: 13  RFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLP-MLVP 71
           ++ +E R    LA+P++L  V+   +GFVD V+AG +    +AAV IGTS+ WLP +L  
Sbjct: 3   KYTSEARQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSI-WLPAILFG 61

Query: 72  IGTLISLTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLLPTF-GIAP 130
            G L++LT  ++QL G+GR   I    RQ  WL+  +  L+   L     ++ +   I P
Sbjct: 62  HGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLVMIVLWNAGYIIRSMHNIDP 121

Query: 131 DIVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVLAPLGYVLTYG 190
            +   A  +L A+ WG P   F+   R   EG+  T P M++GF GLLV  P+ Y+  YG
Sbjct: 122 ALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFLGLLVNIPVNYIFIYG 181

Query: 191 KFGFAEHGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLEGPRWRAIGELLRT 250
            FG  E G  G G+A+A   WV  IA   Y+  +R    +        P    +  L++ 
Sbjct: 182 HFGMPELGGIGCGVATAAVYWVMFIAMLSYIKHARSMRDIRNEKGFGKPDSVVMKRLIQL 241

Query: 251 GLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGVAEATTVRVGH 310
           GLPI + +  E  LF V ALL+  LG  + A HQIA+N S L F++PM +A A T+RVG+
Sbjct: 242 GLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGY 301

Query: 311 AVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTNDAAVAALASVLLLFA 370
            +G+G  L  + AA  G  + +    V+A   +     I  +Y ++  V ALA+ L+L A
Sbjct: 302 RLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTLRKHIALLYNDNPEVVALAAQLMLLA 361

Query: 371 ATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLGLG----LGWGPQGM 426
           A +Q  D IQV+ +G LRG KDTR   F+   +YW LG+P G  L L        GP G 
Sbjct: 362 AVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVDRMGPAGF 421

Query: 427 WIGLILGLTAAAILMGLRFRQTSRRLTA 454
           W+G I+GLT+AA+LM LR R   R+ +A
Sbjct: 422 WMGFIIGLTSAAVLMMLRMRYLQRQPSA 449