Pairwise Alignments

Query, 458 a.a., Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM from Xanthomonas campestris pv. campestris strain 8004

Subject, 457 a.a., multidrug efflux protein NorM (NCBI) from Escherichia coli BW25113

 Score =  281 bits (718), Expect = 4e-80
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 7/444 (1%)

Query: 13  RFAAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLP-MLVP 71
           ++ +E R    LA+P++L  ++   +GFVD V+AG +    +AAV IGTS+ WLP +L  
Sbjct: 3   KYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSI-WLPAILFG 61

Query: 72  IGTLISLTASVSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLLPTF-GIAP 130
            G L++LT  ++QL G+GR   I    RQ  WL+  +  L+   L     ++ +   I P
Sbjct: 62  HGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDP 121

Query: 131 DIVPGATDFLHAVRWGGPALTFYFCMRYLSEGMHWTLPTMLLGFGGLLVLAPLGYVLTYG 190
            +   A  +L A+ WG P   F+   R   EG+  T P M++GF GLLV  P+ Y+  YG
Sbjct: 122 ALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYG 181

Query: 191 KFGFAEHGAQGLGMASAITMWVQAIAFALYLWRSRRFAHLELFTHLEGPRWRAIGELLRT 250
            FG  E G  G G+A+A   WV  +A   Y+ R+R    +        P    +  L++ 
Sbjct: 182 HFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQL 241

Query: 251 GLPIGITVLMEGGLFIVTALLIGRLGSTEAAAHQIAINVSQLCFMIPMGVAEATTVRVGH 310
           GLPI + +  E  LF V ALL+  LG  + A HQIA+N S L F++PM +A A T+RVG+
Sbjct: 242 GLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGY 301

Query: 311 AVGRGDPLGMRRAAWAGYAIVLGTQAVSASILLLGHDAIVGVYTNDAAVAALASVLLLFA 370
            +G+G  L  + AA  G  + +    ++A   +   + I  +Y ++  V  LA+ L+L A
Sbjct: 302 RLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLA 361

Query: 371 ATFQFPDGIQVLSAGALRGLKDTRVPMFLAMFSYWGLGMPLGAGLGLG----LGWGPQGM 426
           A +Q  D IQV+ +G LRG KDTR   ++   +YW LG+P G  L L        GP G 
Sbjct: 362 AVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGF 421

Query: 427 WIGLILGLTAAAILMGLRFRQTSR 450
           WIG I+GLT+AAI+M LR R   R
Sbjct: 422 WIGFIIGLTSAAIMMMLRMRFLQR 445