Pairwise Alignments

Query, 393 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

Subject, 308 a.a., Motility protein B from Escherichia fergusonii Becca

 Score =  208 bits (530), Expect = 1e-58
 Identities = 122/311 (39%), Positives = 180/311 (57%), Gaps = 21/311 (6%)

Query: 8   VIIRRVKKVQGGGHHGGAWKVAFADFVTAMMAFFLVLWLMAATTKEQRAAISEYFRNPSP 67
           V+ RR  K  G  H  G+WK+A+ADF+TAMMAFFLV+WL++ ++ ++   I+EYFR P  
Sbjct: 10  VVKRRKAKSHGAAH--GSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPL- 66

Query: 68  LSGKSPAPSPGMNGPGGASTSMIKLGGTADMAKGQKDEMGRKRDNAADTDVDSRAKDKKR 127
                   +  + G    S S   + G  D     + E+  K+ N  +     +  ++ R
Sbjct: 67  --------ATAVTGGDRISNSESPIPGGGDDYTQSQGEVN-KQPNIEEL---KKRMEQSR 114

Query: 128 LEALMQDLKEAIDKSQALEPFKDQLLLDLTPDGLRIQIVDKQNRPMFDIGRDQLKPYTVD 187
           L  L  DL + I+    L   +  L +DL  +GLRIQI+D QNRPMF  G   ++PY  D
Sbjct: 115 LRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRD 174

Query: 188 ILRELSSFINQVPNHISITGHTDTTAYSS-DAGYTNWELSADRANAARRALVGGGMADAK 246
           ILR ++  +N +PN IS++GHTD   Y+S + GY+NWELSADRANA+RR L+ GG+   K
Sbjct: 175 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGK 234

Query: 247 VTRVVGLSSSVLFDKTNPQNPINRRISIVVMTQDAEQAAL-----AGSDQGVALGKPIPD 301
           V RVVG+++++      P + +NRRIS++V+ + AEQA L     + ++   AL KP   
Sbjct: 235 VLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKHAEQAILHENAESQNEPVSALEKPEVA 294

Query: 302 ADTHVPDLSGA 312
               VP +  A
Sbjct: 295 PQVSVPTMPSA 305