Pairwise Alignments

Query, 237 a.a., Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 235 a.a., Ribosomal small subunit pseudouridine synthase A from Acinetobacter radioresistens SK82

 Score =  121 bits (303), Expect = 1e-32
 Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 13/239 (5%)

Query: 1   MKLVKHIANLGYGSRKQVTQLFRQGAITDAAGEVLYADDQ----VDHAAIRIDGEPLDPP 56
           M L K + + G+GSRK   QL + GAI+      + AD +    + +    + GE  +  
Sbjct: 1   MLLEKILQSQGFGSRKYCQQLIKSGAIS--INHEICADTKAKFDLKNFTFEVHGEEFEYR 58

Query: 57  PGFSVLLHKPSGYTCSTKDTGRL-IYELLPPRFRLRAPVLAPVGRLDRETSGMLLMTDDG 115
               + L+KP GY CS +      +++L  P    R   +  VGRLD++T+G+LL+TDDG
Sbjct: 59  EKVYIALNKPQGYECSHQAQYHFSVFDLFDPALLNRG--IQCVGRLDQDTTGLLLLTDDG 116

Query: 116 ALLHRIISPKSALDKVYDVTLAEDLRGDEAALFASGTLLL-EGETKPLLPAELEVLGARQ 174
             L  +  P+  + KVYD+   + +  ++  L   G  L  +G  K    + ++   + Q
Sbjct: 117 QFLQALTHPRKHVAKVYDLITVDPITPEQIRLLEQGVELRNDGIFKA---SNIKQTSSHQ 173

Query: 175 ARLTLHEGRYHQVRRMFAAAGNHVVALHRSRIGGLSLDGLDAGHWRPLGPDDLEVLFGR 233
             L +H+G YHQV+RM AA GN V  LHRS+IG L L  L  G W  L   ++E+   R
Sbjct: 174 LSLAIHQGVYHQVKRMLAAVGNKVEKLHRSKIGELELPMLAEGEWTYLDQTEIELAKSR 232