Pairwise Alignments

Query, 290 a.a., O-antigen export system permease protein RfbD from Xanthomonas campestris pv. campestris strain 8004

Subject, 284 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  125 bits (313), Expect = 1e-33
 Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 3/266 (1%)

Query: 28  LDMIRSVWAFRYFILSSIRNDLRLRFLRSKLGALWMIIHPLMQVLIFATILSEVLAAKLP 87
           + ++  +W  R  I    R ++  R+  S +G  W  + PL  + ++  + SEV  A+  
Sbjct: 19  VSLVAGLWRNRQLIAQMTRREVLGRYKGSAMGLAWSFVQPLFMLTVYTFVFSEVFKARWG 78

Query: 88  G---VNNKFAYALYLMAGTLCWSMFAESIGKCASLFVDNGNLMKKQAFPRICLPLIAGGT 144
           G   V +K  +A+ L  G +  ++F+E I +  +L + N N +KK  FP   LP+   G 
Sbjct: 79  GAGAVQSKTEFAVLLFVGLIVLNLFSEVINRSPTLVISNVNFVKKVVFPIEVLPVSTMGA 138

Query: 145 VMVNNLLLFLAIIVVFAILGHSLGPQAGWLPLLMLLTLAFAMSIGLLLGIFNVFVRDIGQ 204
            + +  +    ++    +   SL     + PL++L  +   + +  +     VF+RD+GQ
Sbjct: 139 ALFHGCVSVAVLLCAILVFNGSLPWTVVFFPLVLLPLVIVTLGLAWIFASLGVFLRDVGQ 198

Query: 205 VVPVVLQAMFWVTPIVYTIDILPQQTRDLFKLNPLFPLVSAYQGVLLYGRAPDWMSLLPL 264
            + ++   + +V+P+ Y +D +P + + +   NPL  ++   + VL++G+ P+W+ L   
Sbjct: 199 TISLLTTVLMFVSPVFYPVDAVPPRFQPIIMANPLTFIIEQARDVLVWGKQPNWLGLAVY 258

Query: 265 TAATAILGFVSLVVFRRASAEMVDAL 290
             A  ++ +     F++      D L
Sbjct: 259 LIAACVVAWAGYAWFQKTRKGFADVL 284