Pairwise Alignments

Query, 323 a.a., Tyrosine recombinase XerD from Xanthomonas campestris pv. campestris strain 8004

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score =  301 bits (772), Expect = 1e-86
 Identities = 161/303 (53%), Positives = 200/303 (66%), Gaps = 7/303 (2%)

Query: 21  AEDDQAIQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRW 80
           A D   I RFLD LW E+G++  T  +YR DL     W       L  A R  + D+L W
Sbjct: 3   AIDHPLIDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAW 62

Query: 81  RTEARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDAL 140
           R E  Y PRS AR LS +RGFY   LR+ + + DPT  +D P+L R LPK+L+E+ ++AL
Sbjct: 63  RLEQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEAL 122

Query: 141 LAAPEIGTPLGLRDRAMLELMYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPL 200
           LAAP++   +G RDRAMLE++YA GLRV+EL++L    +NLRQGVLRV GKGSKERLVP+
Sbjct: 123 LAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPM 182

Query: 201 GEESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAARRPLSRQQFWGLVKRYAAVAG 260
           GEE+  W+ERY+  AR  L   +          LF       ++RQ FW  +K  A VAG
Sbjct: 183 GEEAIVWVERYMRDARSELLGGRPSDV------LFPSLRGEQMTRQTFWHRIKHQAKVAG 236

Query: 261 IDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHH 320
           I    +SPH LRH+FATHLLNHGADLR +QMLLGHS LSTTQIYT VAR  LQ +HA+HH
Sbjct: 237 IG-KALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHH 295

Query: 321 PRG 323
           PRG
Sbjct: 296 PRG 298