Pairwise Alignments

Query, 323 a.a., Tyrosine recombinase XerD from Xanthomonas campestris pv. campestris strain 8004

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  300 bits (767), Expect = 4e-86
 Identities = 161/303 (53%), Positives = 200/303 (66%), Gaps = 7/303 (2%)

Query: 21  AEDDQAIQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRW 80
           A D   I +FLD LW E+G++  T  SYR DL     W       L  A R  + D+L W
Sbjct: 3   ALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAW 62

Query: 81  RTEARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDAL 140
           R +  Y PRS AR LS LRGF+   LR+ + + DPT  +D P+L + LPK+L+E+ ++AL
Sbjct: 63  RLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEAL 122

Query: 141 LAAPEIGTPLGLRDRAMLELMYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPL 200
           L AP++G  +G RDRAMLE++YA GLRV+ELV+L    +NLRQGVLRV GKGSKERLVP+
Sbjct: 123 LQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPM 182

Query: 201 GEESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAARRPLSRQQFWGLVKRYAAVAG 260
           GEE+  WLERY    R  L   +          LF       ++RQ FW  +K +A VAG
Sbjct: 183 GEEAVVWLERYQRDGRAELLNGRPSDV------LFPSQRGEQMTRQTFWHRIKHHARVAG 236

Query: 261 IDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHH 320
           ID   +SPH LRH+FATHLLNHGADLR +QMLLGHS LSTTQIYT VA+  LQ LHA+HH
Sbjct: 237 ID-KPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHH 295

Query: 321 PRG 323
           PRG
Sbjct: 296 PRG 298