Pairwise Alignments
Query, 1082 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004
Subject, 1023 a.a., DNA polymerase from Pseudomonas simiae WCS417
Score = 1170 bits (3026), Expect = 0.0
Identities = 613/1040 (58%), Positives = 753/1040 (72%), Gaps = 22/1040 (2%)
Query: 47 AYAELHCLSDFSFLRGASSAEQLFARAHHCGYSALAITDECSLAGIVRGLEASRATGVQL 106
+YAELHCLS+FSF RGASSA +LF RA GYSALAITDEC+L+GIVR +A++A + L
Sbjct: 2 SYAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLSGIVRAWQAAKAVELPL 61
Query: 107 IVGSEFTLVDGTRFVLLVENAHGYPQLCSVITTGRRAAGKGAYRLGRAEVEAHFRDVVPG 166
I+GSE + +G + VLLVE+ GY LC +IT RR A KG+YRL R + F +PG
Sbjct: 62 IIGSEVRIDNGPKLVLLVEDLSGYQHLCRLITLARRRAEKGSYRLLRED----FDQPLPG 117
Query: 167 VFALWLPGDQPQAEQGAWLQRVFAERAFLAVELHREQDDAARLQALQALAQQLGMSALAS 226
+ ALW+ D WL+R F ER +LAV LH Q+DA L+ LA L + A+A
Sbjct: 118 LLALWVAEDSDTQADSQWLRRTFGERLWLAVHLHCGQNDARHLEQRLQLAASLHLPAVAC 177
Query: 227 GDVQMAQRRDRIVQDTLTAIRHTLPLADCGAHLFRNGERHLRPRRALGNIYPHALLQASV 286
GDV M R R +QDT+TAIRH +P+A+ G L NGERHLR AL +YP LL +
Sbjct: 178 GDVHMHARGRRALQDTMTAIRHHVPVAEAGTRLHPNGERHLRSLDALAALYPQPLLDETE 237
Query: 287 ELAQRCTFDLSKVQYTYPRELVPQGHTPASYLRQLTEAGMRERWPEGAPAQVVAQIDSEL 346
+A+RCTFDLS+++Y YP ELVP GH S+LR +TE G+ +RWP+G A+ QI+SEL
Sbjct: 238 TIARRCTFDLSQLRYHYPHELVPAGHNAQSWLRAVTEEGIAKRWPQGVDAKTAQQINSEL 297
Query: 347 ELIAYKGYEAFFLTVQDVVRFARAQGILCQGRGSSANSAVCYALGITAVNPSETRLLMAR 406
ELI+ GYE++FLTV D+V+FAR++ ILCQGRGS+ANSAVCYALGIT ++PS T +L R
Sbjct: 298 ELISELGYESYFLTVHDIVQFARSRSILCQGRGSAANSAVCYALGITEIDPSLTSMLFER 357
Query: 407 FLSKERDEPPDIDVDFEHERREEVLQYVYTKYGRERAALAATVICYRGKSAVRDVAKAFG 466
FLS+ER+EPPDIDVDFEHERREEVLQYV+ +YGR RAAL A V Y AVRDVAKA G
Sbjct: 358 FLSRERNEPPDIDVDFEHERREEVLQYVFQRYGRTRAALTAVVSSYHASGAVRDVAKALG 417
Query: 467 LPPDQIALLANCYG-WGNGDTPMEQRIAEAGFDLANPLINKILAVTEHLRDHPRHLSQHV 525
LPPDQI LA+C G W + P++ R+ E GFD +P++ ++L +T+ L PRHLSQH
Sbjct: 418 LPPDQINALADCCGRWSDAAPPLD-RLREGGFDPDSPILRRVLTLTQQLIGFPRHLSQHP 476
Query: 526 GGFVISDEPLSMLVPVENAAMADRTIIQWDKDDLETMKLLKVDCLALGMLTCIRKTLDLV 585
GGFVIS+ PL LVPVENAAMA+RTIIQWDKDDL+ + LLKVD LALGML+ IR+ DL+
Sbjct: 477 GGFVISEYPLDTLVPVENAAMAERTIIQWDKDDLDAVGLLKVDILALGMLSAIRRCFDLL 536
Query: 586 RGHRGRDYTIATLPGEDAATYKMIQRADTVGVFQIESRAQMAMLPRLKPREFYDLVIEVA 645
R HR RD +AT+P ED ATY MI +ADT+GVFQIESRAQM+MLPRLKP++FYDLVIEVA
Sbjct: 537 RRHRNRDLALATIPKEDPATYAMISKADTIGVFQIESRAQMSMLPRLKPQKFYDLVIEVA 596
Query: 646 IVRPGPIQGDMVHPYLRRRQGYEPVSFPSPGVEEILGRTLGIPLFQEQVMEL-VIHAGYT 704
IVRPGPIQG MVHPYLRRR E ++PSP ++ +L RTLGIPLFQEQVM++ ++ A Y
Sbjct: 597 IVRPGPIQGGMVHPYLRRRNKEEETTYPSPELKVVLERTLGIPLFQEQVMQIAMVAADYG 656
Query: 705 DSEADQLRRSMAAWRRGGDMEPHRVRIRELMAGRGYAPEFIDQIFEQIKGFGSYGFPQSH 764
EADQLRRSMAAW+R G +EPH+ R+R M GY+ F QIFEQIKGFGSYGFP+SH
Sbjct: 657 PGEADQLRRSMAAWKRHGGLEPHQERLRTGMLKNGYSEAFAAQIFEQIKGFGSYGFPESH 716
Query: 765 AASFAKLVYASCWLKRHEPAAFACGLLNAQPMGFYSASQIVQDARRGSPERQRVEVLPVD 824
AASFA L YASCWLK HEPAAFAC L+N+ PMGFYS QI+QDAR R R+++ PVD
Sbjct: 717 AASFALLTYASCWLKCHEPAAFACALINSWPMGFYSPDQILQDAR-----RHRLQIRPVD 771
Query: 825 VLHSDWDNILVGGRPWHSDADPGEQPAIRLGLRQVSGLSEKVVERIVAARAQRPFADIGD 884
V SDWD L + G QPAIR+GLR +SG E+ RI AAR +R F+DI D
Sbjct: 772 VQASDWDCSL--------EPIDGAQPAIRMGLRMISGFREEDARRIEAARHRRAFSDIAD 823
Query: 885 LCLRAALDEKARLALAEAGALQSMVGNRNAARWAMAGVEARRPLLPG--SPAERAVELPA 942
L RA LD +A+ LA+AGAL+++ GNR+ ARW +AGV + L G SP E VELP+
Sbjct: 824 LDDRAGLDARAQALLADAGALRALAGNRHKARWEVAGVHKQLGLFAGLPSPDEAVVELPS 883
Query: 943 PRAGEEILADYRAVGLSLRQHPMALLRPQMLQRRILGLRELQARRHGSGVHVAGLVTQRQ 1002
P GE++ ADY VG +L HP+ALLR ++ +RR +EL A HG V VAGLVT RQ
Sbjct: 884 PTVGEDLHADYATVGTTLGPHPLALLRAELRKRRCRSSQELMAVEHGRNVSVAGLVTGRQ 943
Query: 1003 RPATAKGTIFVTLEDEHGMINVIVWSHLAMRRRRALLESRLLAVRGRWERVDGVEHLIAG 1062
RP TA G FVTLEDE G +NV+VW LA R+R+AL+ SRL+ V GRWE V V HLIAG
Sbjct: 944 RPGTASGVTFVTLEDEFGNLNVVVWRDLAERQRQALVGSRLMKVDGRWEAVGEVRHLIAG 1003
Query: 1063 DLYDLSDLLGEMQLPSRDFH 1082
L DL+ LL + + SRDFH
Sbjct: 1004 RLTDLTPLLEGITVRSRDFH 1023