Pairwise Alignments

Query, 1082 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1033 a.a., error-prone DNA polymerase from Pseudomonas putida KT2440

 Score = 1155 bits (2987), Expect = 0.0
 Identities = 603/1043 (57%), Positives = 750/1043 (71%), Gaps = 26/1043 (2%)

Query: 46   PAYAELHCLSDFSFLRGASSAEQLFARAHHCGYSALAITDECSLAGIVRGLEASRATGVQ 105
            P YAELHCLS+FSF RGASSA++LF RA   GY ALAITDEC+LAGIVR  +A++   ++
Sbjct: 11   PGYAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLR 70

Query: 106  LIVGSEFTLVDGTRFVLLVENAHGYPQLCSVITTGRRAAGKGAYRLGRAEVEAHFRDVVP 165
            LIVGSE  L DG + VLLVEN  GY  LC++IT  RR A KGAY+L R ++  H +    
Sbjct: 71   LIVGSEVQLCDGPKLVLLVENLTGYQNLCALITRARRRAEKGAYQLFRDDLLLHHQ---- 126

Query: 166  GVFALWLPGDQPQAEQGAWLQRVFAERAFLAVELHREQDDAARLQALQALAQQLGMSALA 225
            G+ ALW+  D      GAWL+ VFAER +LAV LHR  DDA RLQ L+ALA  +G+ A+A
Sbjct: 127  GLLALWVAADSGDTATGAWLRSVFAERLWLAVHLHRGSDDAVRLQRLRALAADVGIRAVA 186

Query: 226  SGDVQMAQRRDRIVQDTLTAIRHTLPLADCGAHLFRNGERHLRPRRALGNIYPHALLQAS 285
             GDV M  R  R +QD +TAIR    +++ G  LF NGERHLR +  L  +YP  LL  +
Sbjct: 187  CGDVHMHVRGRRALQDCMTAIRQHCQVSEAGRFLFANGERHLRSQAQLAELYPLDLLAET 246

Query: 286  VELAQRCTFDLSKVQYTYPRELVPQGHTPASYLRQLTEAGMRERWPEGAPAQVVAQIDSE 345
            + +A+RC FDLS++ Y YPRELVP+GHTPAS+LR+L E GM  RWP+G   +V   +  E
Sbjct: 247  LVIARRCQFDLSELNYQYPRELVPEGHTPASWLRELCEQGMPLRWPDGPSGKVRDVLAKE 306

Query: 346  LELIAYKGYEAFFLTVQDVVRFARAQGILCQGRGSSANSAVCYALGITAVNPSETRLLMA 405
            L LI   GYE++FLTV D+V FAR+Q ILCQGRGS+ANS VC+ LGIT ++P +  LL  
Sbjct: 307  LGLIEELGYESYFLTVHDIVAFARSQRILCQGRGSAANSVVCFVLGITELDPMKHHLLFE 366

Query: 406  RFLSKERDEPPDIDVDFEHERREEVLQYVYTKYGRERAALAATVICYRGKSAVRDVAKAF 465
            RFLS+ER+EPPDIDVDFEH+RREEV+QYV+ +YGR RAAL A V  Y    AVRDVA+A 
Sbjct: 367  RFLSRERNEPPDIDVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARAL 426

Query: 466  GLPPDQIALLANCYGWGNGDTPMEQRIAEAGFDLANPLINKILAVTEHLRDHPRHLSQHV 525
            GLP DQ+  LA C G  +   P +QR+AEAGF+  +P + ++L +   L   PRHLSQH 
Sbjct: 427  GLPADQVDALAKCCGRWSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHP 486

Query: 526  GGFVISDEPLSMLVPVENAAMADRTIIQWDKDDLETMKLLKVDCLALGMLTCIRKTLDLV 585
            GGFVIS +PL  LVPVENAAM +RT+IQWDKDDL+ + LLKVD LALGML+ +R+  D +
Sbjct: 487  GGFVISQQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQL 546

Query: 586  RGHRGRDYTIATLPGEDAATYKMIQRADTVGVFQIESRAQMAMLPRLKPREFYDLVIEVA 645
            + HRGR  T+AT+P ED ATY MI RA+T+GVFQIESRAQMAMLPRL+P++FYDLVIEVA
Sbjct: 547  QHHRGRHLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVA 606

Query: 646  IVRPGPIQGDMVHPYLRRRQGYEPVSFPSPGVEEILGRTLGIPLFQEQVMEL-VIHAGYT 704
            IVRPGPIQGDMVHPYLRRR   EPV++PSP ++E+  RTLG+PLFQEQVMEL ++ A YT
Sbjct: 607  IVRPGPIQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYT 666

Query: 705  DSEADQLRRSMAAWRRGGDMEPHRVRIRELMAGRGYAPEFIDQIFEQIKGFGSYGFPQSH 764
              EADQLRRSMAAW+R G +EPHR R+ + M   GY   F ++IFEQIKGFGSYGFP+SH
Sbjct: 667  PGEADQLRRSMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESH 726

Query: 765  AASFAKLVYASCWLKRHEPAAFACGLLNAQPMGFYSASQIVQDARRGSPERQRVEVLPVD 824
            AASFA L YAS WLK HEPA F C L+N+ PMGFYS  Q++Q+AR     RQ +EV PVD
Sbjct: 727  AASFALLCYASSWLKCHEPAIFTCALVNSWPMGFYSPDQLLQEAR-----RQGIEVRPVD 781

Query: 825  VLHSDWDNILVGGRPWHSDADPGEQPAIRLGLRQVSGLSEKVVERIVAARAQRPFADIGD 884
            V HSDWD  L        + D     AIR+GLR V GL+E   +R+  AR+QRP+ ++ D
Sbjct: 782  VCHSDWDCTL--------EPDAEGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVED 833

Query: 885  LCLRAALDEKARLALAEAGALQSMVGNRNAARWAMAGVEARRPLLPGSPA--ERAVELPA 942
            LCLRA LD +AR  LA+ GAL+++  +R+ ARW +A V+ + PL     A  E  V+LP 
Sbjct: 834  LCLRAGLDARARARLADGGALRALASDRHQARWQVAAVQPQLPLFADVQALPEEPVQLPV 893

Query: 943  PRAGEEILADYRAVGLSLRQHPMALLRPQMLQRRILGLR---ELQARRHGSGVHVAGLVT 999
            P  GE+++ADY+ +G +L  HP+ALLR ++   R LG R   ELQ   HG  + VAGLV 
Sbjct: 894  PTVGEDLMADYQTLGTTLGPHPLALLRARL---RALGCRSSSELQGVEHGDNIAVAGLVV 950

Query: 1000 QRQRPATAKGTIFVTLEDEHGMINVIVWSHLAMRRRRALLESRLLAVRGRWERVDGVEHL 1059
             RQRP TA G  FVTLEDEHGM+NV+VW  LA R+RRAL+ S+LL V GR E+ +GV HL
Sbjct: 951  GRQRPQTASGVTFVTLEDEHGMVNVVVWRALAERQRRALVGSQLLKVSGRLEQENGVRHL 1010

Query: 1060 IAGDLYDLSDLLGEMQLPSRDFH 1082
            IA  L D+S LL  + + SRDFH
Sbjct: 1011 IARRLEDVSPLLQGLDVRSRDFH 1033