Pairwise Alignments

Query, 525 a.a., Serine protease precursor MucD/AlgY associated with sigma factor RpoE from Xanthomonas campestris pv. campestris strain 8004

Subject, 479 a.a., serine peptidase from Pseudomonas simiae WCS417

 Score =  379 bits (972), Expect = e-109
 Identities = 222/478 (46%), Positives = 290/478 (60%), Gaps = 26/478 (5%)

Query: 46  PQLVAGLPDFTNLVEQVGPGVVNIETTITRKDAMARSQRGGPGGRGGGAMPDDEQMPEFF 105
           P     LPDFT LVEQ  P VVNI TT    +    +Q+          MPD E +P   
Sbjct: 24  PAQAVELPDFTQLVEQASPAVVNISTTQKLPERKVSNQQ----------MPDLEGLPPML 73

Query: 106 KRFFGPDFQMPGGPRQGPGQGDDDGGIAGKSMGSGFIISADGYVLTNHHVVDGASEVTVK 165
           + FF      P  PR G G     G    +S+GSGFIIS+DGY+LTN+HV+  A E+ V+
Sbjct: 74  REFFERGMPQPRAPRGGGG-----GQREAQSLGSGFIISSDGYILTNNHVIADADEILVR 128

Query: 166 LTDRREFKAKVVGSDEQFDVALLKIEAKGLPTVRIGDSNTLKPGQWVVAIGSPFGLDHSV 225
           L DR E KAK+VG+D + DVALLKIE K LP +++G S  LK GQWVVAIGSPFG DH+V
Sbjct: 129 LADRSELKAKLVGTDPRSDVALLKIEGKDLPVLKLGKSQDLKAGQWVVAIGSPFGFDHTV 188

Query: 226 TAGIVSATGRSNPYADQRYVPFIQTDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGYM 285
           T GIVSA GRS P  ++ YVPFIQTDV IN GNSGGPL N  GEVVGINSQI++ SGG+M
Sbjct: 189 TQGIVSAIGRSLP--NENYVPFIQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFM 246

Query: 286 GISFAIPIDLAFSAAEQIKASGHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPAG 345
           G+SFAIPID+A   + Q+K+ G VSRG LGV +  ++   A+  GL    GALV  I   
Sbjct: 247 GVSFAIPIDVAMDVSNQLKSGGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQIQDD 306

Query: 346 SPAGKAGIEVGDVIRSVNGKEIAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTLGT 405
            PA K G+ VGDVI S+NG+ I +++DLP ++G +  G+K  L V+R+GK + V +T+G 
Sbjct: 307 GPAAKGGLHVGDVILSMNGQPIVMSADLPHLVGALKAGSKAKLEVIREGKRQTVELTVGA 366

Query: 406 LENESGSSAPRTAADDSKPSAPASVELLGLQVADLTAAERSRMGLEAGEGVRIASVTGSA 465
           +  E    A   A  ++KP A  S   LG+ VA+LTA ++    L++  GV I  V    
Sbjct: 367 IPEE---GATLDALGNTKPGAERSSNRLGIAVAELTAEQKKTFDLKS--GVVIKEVQDGP 421

Query: 466 ARSTQPPLAPGLVIARVGRTKVGSVAEL-NRALASYKKGDVVMLLVTDGKATSYVALK 522
           A  +   L PG VI  +    + S  +  + A A  K   V M ++  G+A S++  K
Sbjct: 422 A--SLIGLQPGDVITHLNNQAIDSTKQFTDIAKALPKNRSVSMRVLRQGRA-SFITFK 476



 Score = 41.6 bits (96), Expect = 7e-08
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 290 AIPIDLA-FSAAEQIKASGHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPAGSPA 348
           AIP + A   A    K     S   LG+AV  +   + +   L    G ++ ++  G PA
Sbjct: 366 AIPEEGATLDALGNTKPGAERSSNRLGIAVAELTAEQKKTFDLKS--GVVIKEVQDG-PA 422

Query: 349 GKAGIEVGDVIRSVNGKEIAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTL 403
              G++ GDVI  +N + I        +   +P    VS+ VLR G+   +T  L
Sbjct: 423 SLIGLQPGDVITHLNNQAIDSTKQFTDIAKALPKNRSVSMRVLRQGRASFITFKL 477