Pairwise Alignments

Query, 525 a.a., Serine protease precursor MucD/AlgY associated with sigma factor RpoE from Xanthomonas campestris pv. campestris strain 8004

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  372 bits (956), Expect = e-107
 Identities = 218/478 (45%), Positives = 285/478 (59%), Gaps = 27/478 (5%)

Query: 45  APQLVAGLPDFTNLVEQVGPGVVNIETTITRKDAMARSQRGGPGGRGGGAMPDDEQMPEF 104
           A Q    LPDFT LVEQ  P VVNI T     D    + +          MPD E +P  
Sbjct: 39  AAQAEEALPDFTTLVEQASPAVVNISTKQKLPDRRIAANQ----------MPDLEGLPPM 88

Query: 105 FKRFFGPDFQMPGGPRQGPGQGDDDGGIAGKSMGSGFIISADGYVLTNHHVVDGASEVTV 164
           F+ FF  +  MP  PR   G    +     +S+GSGFIIS+DGYVLTN+HVV  A E+ V
Sbjct: 89  FREFF--ERNMPQQPRSPRGDRQREA----QSLGSGFIISSDGYVLTNNHVVADADEIIV 142

Query: 165 KLTDRREFKAKVVGSDEQFDVALLKIEAKGLPTVRIGDSNTLKPGQWVVAIGSPFGLDHS 224
           +L+DR E +AK+VG+D + DVALLK++ K LPTV++GDS  LK G+WV+AIGSPFG DHS
Sbjct: 143 RLSDRSELQAKLVGTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHS 202

Query: 225 VTAGIVSATGRSNPYADQRYVPFIQTDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGY 284
           VT GIVSA GR+ P  +  YVPFIQTDVAIN GNSGGPL N +GEVVGINSQIF+ SGG+
Sbjct: 203 VTKGIVSAKGRTLP--NDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGF 260

Query: 285 MGISFAIPIDLAFSAAEQIKASGHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPA 344
           MG+SFAIPID+A   + Q+K  G VSRG LGV +  ++   A+  GL    GALV  +  
Sbjct: 261 MGLSFAIPIDVAIDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQVLE 320

Query: 345 GSPAGKAGIEVGDVIRSVNGKEIAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTLG 404
             PA K G++VGDVI S+NG+ I +++DLP ++G +  G K  L ++R+GK + + +++G
Sbjct: 321 NGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVG 380

Query: 405 TLENESGSSAPRTAADDSKPSAPASVELLGLQVADLTAAERSRMGLEAGEGVRIASVTGS 464
            L ++       T     + SA  S   LG+ VADLTA ++    LE   GV I  V   
Sbjct: 381 ALPDDDVDIGAGT-----EGSAERSSNRLGVSVADLTAEQKK--SLELKGGVVIKEVQDG 433

Query: 465 AARSTQPPLAPGLVIARVGRTKVGSVAELNRALASYKKGDVVMLLVTDGKATSYVALK 522
            A      L PG VI+ +    +GS  E         K   V + V      S++  K
Sbjct: 434 PA--AMIGLRPGDVISHLNNQAIGSAKEFTEIAKELPKNRSVSMRVLRQGRASFITFK 489



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 304 KASGHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPAGSPAGKAGIEVGDVIRSVN 363
           + S   S   LGV+V  +   + + L L    G ++ ++  G PA   G+  GDVI  +N
Sbjct: 394 EGSAERSSNRLGVSVADLTAEQKKSLELKG--GVVIKEVQDG-PAAMIGLRPGDVISHLN 450

Query: 364 GKEIAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTL 403
            + I  A +   +   +P    VS+ VLR G+   +T  L
Sbjct: 451 NQAIGSAKEFTEIAKELPKNRSVSMRVLRQGRASFITFKL 490