Pairwise Alignments

Query, 525 a.a., Serine protease precursor MucD/AlgY associated with sigma factor RpoE from Xanthomonas campestris pv. campestris strain 8004

Subject, 455 a.a., serine endoprotease, periplasmic from Escherichia coli BL21

 Score =  269 bits (688), Expect = 1e-76
 Identities = 185/519 (35%), Positives = 282/519 (54%), Gaps = 69/519 (13%)

Query: 6   RTQMFGLLAMTLPLAACAQQPEAPAKTSAPIAANRSTTPAPQLVAGLPDFTNLVEQVGPG 65
           +TQ+   LA+++ L   A   +A A     +A            A LP    ++E+V P 
Sbjct: 4   QTQLLSALALSVGLTLSASF-QAVASIPGQVADQ----------APLPSLAPMLEKVLPA 52

Query: 66  VVNIETTITRKDAMARSQRGGPGGRGGGAMPDDEQMPEFFKRFFGPDFQMPGGPRQGPGQ 125
           VV++                    R  G     +++PE FK+FFG D  +P  P Q P +
Sbjct: 53  VVSV--------------------RVEGTASQGQKIPEEFKKFFGDD--LPDQPAQ-PFE 89

Query: 126 GDDDGGIAGKSMGSGFIISAD-GYVLTNHHVVDGASEVTVKLTDRREFKAKVVGSDEQFD 184
           G          +GSG II+A  GYVLTN+HV++ A +++++L D REF AK++GSD+Q D
Sbjct: 90  G----------LGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSD 139

Query: 185 VALLKIEAKG-LPTVRIGDSNTLKPGQWVVAIGSPFGLDHSVTAGIVSATGRSNPYADQR 243
           +ALL+I+    L  + I DS+ L+ G + VA+G+PFGL  + T+GIVSA GRS    +  
Sbjct: 140 IALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEG- 198

Query: 244 YVPFIQTDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGYMGISFAIPIDLAFSAAEQI 303
              FIQTD +IN+GNSGG LLN  GE++GIN+ I +  GG +GI FAIP ++A + A+Q+
Sbjct: 199 LENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQL 258

Query: 304 KASGHVSRGMLGVAVGPIDTLKAQGLGLPDTRGALVNDIPAGSPAGKAGIEVGDVIRSVN 363
              G + RG+LG+    +    A+   L   RGA V+++  GS + KAG++ GD+I S+N
Sbjct: 259 IDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLN 318

Query: 364 GKEIAVASDLPPMIGLMPPGTKVSLNVLRDGKPRQVTVTLGTLENESGSSAPRTAADDSK 423
           GK +   ++L   I    PGTKV L +LR+GKP +V VTL T  + S S+   T A    
Sbjct: 319 GKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPA---- 374

Query: 424 PSAPASVELLGLQVADLTAAERSRMGLEAGEGVRIASVTGSAARSTQPPLAPGLVIARVG 483
                      L+ A L+  +      + G+G++I  V    + + Q  L    VI  V 
Sbjct: 375 -----------LEGATLSDGQLK----DGGKGIKIDEVV-KGSPAAQAGLQKDDVIIGVN 418

Query: 484 RTKVGSVAELNRALASYKKGDVVMLLVTDGKATSYVALK 522
           R +V S+AE+ + LA+  K  ++ L +  G  + Y+ ++
Sbjct: 419 RDRVNSIAEMRKVLAA--KPAIIALQIVRGNESIYLLMR 455