Pairwise Alignments

Query, 830 a.a., FIG003033: Helicase domain protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 831 a.a., ATP-dependent RNA helicase from Xanthomonas campestris pv. campestris strain 8004

 Score = 82.4 bits (202), Expect = 1e-19
 Identities = 102/375 (27%), Positives = 147/375 (39%), Gaps = 47/375 (12%)

Query: 30  QRDVWKRYLDGESGLLHTPTGSGKTLAAFGGPLLEALAARGRTPPATAVARGRRQPQRSL 89
           Q D W     GE   + TPT SGK+L  +  P++ A    G                   
Sbjct: 83  QADAWAASQRGEHVAIVTPTASGKSLC-YTLPVVSAAMTAGA------------------ 123

Query: 90  QVLWITPLRALAADTARALREPVEALGLDWQVGLRTGDASARDKRLARSGKLDVLVTTPE 149
           + L++ P +ALA D    L E   A  L  +     GD    D R A     D++V+ P+
Sbjct: 124 KALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGDTPG-DARQAIRLHGDIVVSNPD 182

Query: 150 SL--ALLLSYPDTAPQLAALRCVIVDEWHELLGNKRGVLLQLCLARLRSWSPALRIWGL- 206
            L  A+L  +   A     LR V++DE H      RGV        LR        +G  
Sbjct: 183 MLHQAILPHHTKWAQFFENLRYVVIDEIHTY----RGVFGSHVTNVLRRLKRICAFYGAN 238

Query: 207 ------SATLGNLAQARDVLLPHQPDAALVSGVKPRAMTLETLLPETGERFPWAGHLGLA 260
                 SAT+GN       L+  +  A   SG       +    P           LGL 
Sbjct: 239 PQFILCSATIGNPHAHAQALIEERVHAITESGAPTGDKHVLLWNPPVVN-----ADLGLR 293

Query: 261 QLARVLHKLMEQRT------SLVFTNTRAQAELWHQALSAVW---PEDAATLALHHGSLD 311
             AR     + +        +LVF  TR   E+  + L  ++   P   A +  + G   
Sbjct: 294 ASARSQSNRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPARIRAYRGGYL 353

Query: 312 PALRTAAEHGLRDGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARLLQRAGRARHRP 371
           P  R   E  +R G++  +V+TS+L+LGVD  A+D V+  G P  +A   QR GRA  R 
Sbjct: 354 PTERREVERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAGRRQ 413

Query: 372 GESGHVVCVPSHALE 386
             +  V+   S  L+
Sbjct: 414 QPALGVLVASSQPLD 428