Pairwise Alignments

Query, 830 a.a., FIG003033: Helicase domain protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 830 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  746 bits (1927), Expect = 0.0
 Identities = 408/822 (49%), Positives = 525/822 (63%), Gaps = 13/822 (1%)

Query: 16  RAWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGGPLLEALAARGRTPPA 75
           R WF  RGW P  FQ++VW    +GESGLLH  TGSGKT A +   L     A+  T  A
Sbjct: 9   RRWFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRF--AKANTLTA 66

Query: 76  TAVARGRRQPQRSLQVLWITPLRALAADTARALREPVEALGLDWQVGLRTGDASARDKRL 135
               R R+ P   L VLWITP+RALAADTARAL  P+  L + W VGLRTGD S  ++  
Sbjct: 67  DNKPRKRKPPAEPLSVLWITPMRALAADTARALEAPLAELDIPWSVGLRTGDTSGSERAR 126

Query: 136 ARSGKLDVLVTTPESLALLLSYPDTAPQLAALRCVIVDEWHELLGNKRGVLLQLCLARLR 195
                   L+TTPESL LLL+  D    L+ L+ V+VDEWHEL+GNKRGV LQL LARLR
Sbjct: 127 QSRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLR 186

Query: 196 SWSPALRIWGLSATLGNLAQARDVLLPHQPDAALVSGVKPRAMTLETLLPETGERFPWAG 255
            W+P L +WG+SATLGN   A+ VL+        V G   + + ++TLLP + ERFPWAG
Sbjct: 187 RWNPQLIVWGISATLGNQQHAQQVLIGD--GGVTVQGKIVKDLQVDTLLPSSIERFPWAG 244

Query: 256 HLGLAQLARVLHKLMEQRTSLVFTNTRAQAELWHQALSAVWPEDAATLALHHGSLDPALR 315
           H+GL  L +V+ ++    + LVFTNTRAQ+E+W+QAL    P+ A  +ALHHGSL   +R
Sbjct: 245 HMGLRMLPQVVAEVESSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREVR 304

Query: 316 TAAEHGLRDGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARLLQRAGRARHRPGESG 375
              E  L++G+L+ VV TSSLDLGVDF  V++VLQ+GSPKG+ARL+QRAGR+ H PG   
Sbjct: 305 DWVERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRPS 364

Query: 376 HVVCVPSHALELLEYAAARRAIAQGQIETRPPPRLSLDVLAQHCVTLALGGGFQADALLR 435
            V  VP+H+LEL+E AAA  A+    IE R  P   LDVL QH V++ALGGGF  D LL 
Sbjct: 365 RVTLVPTHSLELVEAAAAHDAVEARMIEPRESPHQPLDVLVQHLVSIALGGGFLPDELLG 424

Query: 436 EVRGTDAFATLDEATWQAVLDFIVQGGSALAHYPDFHKVVRDDAGIYRVTDRRVALRHRL 495
           EVR   A+  L +  WQ  L F+  GG +L  YPD+ +   D+ G++RV D R+A RHR+
Sbjct: 425 EVRSAWAYHDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEDGVWRVPDARLARRHRM 484

Query: 496 SIGTITSDGSVRVQFLR----GGRLGAVEEQFVGRLKRGDRFQFAGRLLELVRLEDMTAY 551
           S+GTI S+ +V +++ +    GG LG+VEE F+ RLK GD F F GRLLELVR+E+MTAY
Sbjct: 485 SVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTAY 544

Query: 552 VRIAKGGSGVVPKWMGGRMPLSSALGREV----EAVFADPGDAPEMHTLAPLLQLQSSLS 607
           V+ A G    VP+W GGRMPLSS L   V    +A      ++PEM  + PLL++Q   S
Sbjct: 545 VKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGQFNSPEMRAIKPLLEVQQHWS 604

Query: 608 ALPGPGHLLVETIKARDGRHLFVYPFAGRQVNEGLAALLAARWGRRQRNTFSFAANDYGF 667
            LP    LL ET+K+R+G HLF+YPFAGR V+ GL +LLA R  R +  TFS A NDYG 
Sbjct: 605 GLPRRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYGL 664

Query: 668 VLSPAQDVPVDAALLQELLSPARLFEDLRDSLNLGELARRQFREIARVAGLLSPSLPGRA 727
            L  A ++     L  EL S   L  D+  SLN GELA R+FREIAR++GL+    PG A
Sbjct: 665 ELLSASEIDWSQTLQAELFSETDLLPDIIASLNAGELALRRFREIARISGLVFSGYPG-A 723

Query: 728 PRSLRQLQASSGLLYDVLQRFDPEHLLLAQAEREVFEGQLEFARLASALEDCAARVLRLC 787
            +S RQLQASSGL ++V +++D +++LL QAE+EV   +L+  RL   L    +R L L 
Sbjct: 724 AKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRTLDLH 783

Query: 788 TPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAAQLERKHG 829
             +  TPL+FPL  ER R  LS+E    R+ R    LE+  G
Sbjct: 784 AIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAAG 825