Pairwise Alignments

Query, 907 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 315 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 84.7 bits (208), Expect = 8e-21
 Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 15/305 (4%)

Query: 61  SEATASGWRRALPVIISLAILAMALHALSSQFTDHGYRQIRQAFRALGAGQIALTLLLGL 120
           +E+    W++  P+ I+  ++ + L  L ++  D  + ++ Q         + +   L L
Sbjct: 3   TESRFKRWKK--PLTIAFFLVLIVLFTLLARRID--WSEVVQTLGDFKVRTLVIAGALTL 58

Query: 121 SSYACLVGFDWVGLKRTGKRLHPARVGITAFMAHAVGQTLGFAALTGG-AVRLRGYGSVG 179
            S+     FD +G     + L   ++     +++A    L  +A  GG A+R R Y  +G
Sbjct: 59  CSFLVYASFDLIGRTYIRQNLVWKQILPVGIISYAFN--LNLSAWVGGIAMRYRLYSRLG 116

Query: 180 LTLAEIGQVVLMSTLGFIFGAWVLLGIAL---MLEPEAAARALPIAAEGIRIAGIALLAG 236
           ++ + I +++ +S     FG   + G+     ++      +    A +GI    +    G
Sbjct: 117 VSTSNIAKILGLSLATNWFGYMAIAGVVFSSGLVTMPPGWKVSTTALQGIGALLVLASLG 176

Query: 237 YLAMLVLVGRHGREFGIRSHRFWLPDRTTVLGVTALSVVELGLAAAAFYVLLPPDPGTGY 296
           YL  L       R + IR     LP          L  +   L AA  + LLP      Y
Sbjct: 177 YL--LACQFSKKRAWTIRGMEINLPSVRMACLQLMLGALNWSLMAAVIFTLLPAK--LDY 232

Query: 297 FGFIGIWLVAVVAGLISTVPAGLGVFEWSLLKLLPH-VTPAAVLAAALAYRVTYYIVPLL 355
              +G+ L++ +AG+++ +PAGLGV E   + LL H  +  ++LA  +AYR  Y+IVPLL
Sbjct: 233 PLVLGVLLISAIAGVLTHIPAGLGVLEAVFIALLQHEASRGSLLAGLIAYRAIYFIVPLL 292

Query: 356 ISVAM 360
           I++ M
Sbjct: 293 IALVM 297