Pairwise Alignments

Query, 907 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 880 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  458 bits (1179), Expect = e-133
 Identities = 310/870 (35%), Positives = 447/870 (51%), Gaps = 37/870 (4%)

Query: 53  PMTDTPVPSEATASGWRRALPVIISLAILAMALHALSSQFTDHGYRQIRQAFRALGAGQI 112
           P+T T +      S +R+ + + ++L + A+AL A      +     +  +   +    +
Sbjct: 17  PITPTRLRWLDLVSKYRQPIGLAVTLLLFAIALIACRHLLLELDLYALHDSILEVPKPAL 76

Query: 113 ALTLLLGLSSYACLVGFDWVGLKRTGKRLHPARVGITAFMAHAVGQTLGFAALTGGAVRL 172
                  ++ +  L+G+++ G +  G  L    + +  F A A+G  +G + L+GG+VR 
Sbjct: 77  LGAFAAAVAGFIILLGYEFSGARYAGVNLPAKTLALGGFTAFAIGNAIGLSMLSGGSVRY 136

Query: 173 RGYGSVGLTLAEIGQVVLMSTLGFIFGAWVLLGIALMLEPEAAARAL--PIAAEGIRIAG 230
           R Y   G+  +E+ ++ + ++L        L  +A +    AA+  L  P A  G  IAG
Sbjct: 137 RLYARHGIGASEVARMTVFASLALGTALPPLAALATLSNLPAASTYLHLPQAVLG-GIAG 195

Query: 231 IALLAGYLAMLVLVGRHGREF-------------GIRSHRFWLPDRTTVLGVTALSVVEL 277
             LL   L+  + +G + R               G R+ R  LP R        ++ +++
Sbjct: 196 AVLL---LSAALCIGIYRRRLPEQPYPDNLLVKAGRRTLR--LPGRRLTFLQLIITALDV 250

Query: 278 GLAAAAFYVLLPPDPGTGYFGFIGIWLVAVVAGLISTVPAGLGVFEWSLLKLLPHVTPAA 337
             AA   Y+LLP  P  G   F+ ++L+A+ AG++S VP G+GVFE  LL        AA
Sbjct: 251 AAAATVLYMLLPEAPPFG--PFLLVYLLALAAGVLSHVPGGVGVFEAILLAAFADKLGAA 308

Query: 338 VLAAALA-YRVTYYIVPLLISVAMAAATGLRAPVRASASTARTVWKTLRPWLPQILALAV 396
            LAAAL  YR+ Y ++PLLI+         +   +   S      +        +LA+ V
Sbjct: 309 PLAAALLLYRMIYVVLPLLIACVFLLVNEAQRLFQTQQSL-----RVASGLAAPVLAVLV 363

Query: 397 FAVGAALVIDGTLPTPRARQE----VAPLPLIETSHLLVSLGGMLLLLIGQGLQRRSHSA 452
           F  G  L+  G  P   +R E    + P  LI+ SH   SL G+L LL+ QGL+RR  +A
Sbjct: 364 FLSGVVLLFSGATPEIDSRLENIGFLIPHRLIDASHFGASLIGVLCLLLAQGLRRRLSAA 423

Query: 453 WVLALGVCVLLPPLSLLRGSHISVSLSAALAAVALWAARREFYRQGALLDEAWSWRWLSN 512
           W+L + + ++   LSLL+G     +    + A+ L   RR FYR   L +  +S  +L  
Sbjct: 424 WMLTMVLLLVGALLSLLKGFDWEEASLMTMTAILLAIFRRSFYRASRLTELPFSPLYLVA 483

Query: 513 LGLVLVATFWLLFFVYSHVEYSNDLWWQFATSANAPRALRALLILCVGVILFGTARLLRG 572
              VL A+ WLL F Y  V YS+ LWWQF   ANAPR LR+LL   V +++     LLR 
Sbjct: 484 SVCVLGASIWLLLFAYQDVPYSHQLWWQFTLDANAPRGLRSLLGAAVVLVIVSLTWLLRT 543

Query: 573 GRRPMPPADAQALQALAPVLASSADTQACLALTGDKAFLRDEKGLGFVMMQRYGGSLISM 632
            R  +       L+  + +L +S+     LALTGDKA L       F+M  R G SL+++
Sbjct: 544 ARPVIHLPTPDELERASKILMASSQPDGGLALTGDKALLFHPNDEAFLMYARRGRSLVAL 603

Query: 633 GDPVGPPEVARALIWRFREEADHMGLRPVFYQVGEKYWQTYLDMGLTLVKLGEEAIVPLE 692
            DP+GP +    +IW+FR+  D    RPVFYQV  +    Y+D+GLT +KLGEEA V L+
Sbjct: 604 YDPIGPTQQRAEMIWQFRDLCDIHHARPVFYQVRAENLPYYMDIGLTAIKLGEEARVDLK 663

Query: 693 GFTLE--GRDRADLRQAWNRGKRGGLSFRMLQPEQVDAVMAELGEVSEQWLDEKAGEEKG 750
            F LE  G++  DLR  WNRG R GLS  + +P    A M EL  +S+ WL  K   EKG
Sbjct: 664 RFDLEAKGKEMKDLRYTWNRGSRDGLSLEICEPG--TAPMDELKVISDAWLTGKNVREKG 721

Query: 751 FSLGSFDPDYLRRFPMAVAEAEGKIVAFANVWCAPAGGELSVDLMRHSAQAPKGTMDFLF 810
           FSLG F  DYL+ F +A+   EG+ VAFAN+         S+DLMR    APK TM+F+ 
Sbjct: 722 FSLGRFSDDYLKHFRIAIIRFEGRPVAFANLLETYNHDLASLDLMRAHPDAPKLTMEFMM 781

Query: 811 IELFLWGHANGYTRFSLGMAPLSGLAEHRLAGRWNRFASLVARHGERFYGFSGLRRFKSK 870
           + L     ++GY RFSLGM PLSGL   R A    R  S+V R GE+ Y F GLRRFK K
Sbjct: 782 VGLIQHYKSHGYARFSLGMVPLSGLQPRRGAPLTQRLGSMVFRRGEQLYNFQGLRRFKDK 841

Query: 871 FAPTWRPRYLVAPGGMHLPAALLDVTRLIS 900
           F P W PRY+  P G+    AL D   LI+
Sbjct: 842 FQPDWEPRYMAVPAGLDPLVALADTAALIA 871