Pairwise Alignments

Query, 907 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 333 a.a., Inner membrane protein YbhQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 97.8 bits (242), Expect = 9e-25
 Identities = 113/341 (33%), Positives = 159/341 (46%), Gaps = 29/341 (8%)

Query: 61  SEATASGWRRALPVII-SLAILAMALHALSSQFTDHGYRQIRQAFRALGAGQIALTLLLG 119
           S A    WR    V   +LA L +AL A  ++  D  + Q+  + R L   ++AL +  G
Sbjct: 2   SPARQQAWRWTKRVAPWALAALVLALVAQQARAVD--WSQVWVSLRQLPPWRLALAV--G 57

Query: 120 LSSYACLV--GFDWVGLKRTGKRLHPARVGITAFMAHAVGQTLGFAALTGG-AVRLRGYG 176
           L++ +C V  GFD VG   T   L   R    A +++A    L F AL GG A+RLR Y 
Sbjct: 58  LAALSCTVYAGFDLVGRHLTRHGLPVPRTLGAAAISYAFN--LNFGALVGGLAMRLRLYT 115

Query: 177 SVGLTLAEIGQVVLMS-TLGFIFGAWVLLGIALMLEPEAAARALPIAAEGIRIAGIALLA 235
             G+  A + +V+ +S T  ++   WV  G+ L   P   A   P  A  +R  G A++ 
Sbjct: 116 RWGVAAATVAKVIALSMTTNWLGYLWVAGGVLLWSPPVLPAGWAPGDAV-LRSLGAAMVG 174

Query: 236 GYLAMLVLVG-RHGREFGIRSHRFWLPDRTTVLGVTALSVVELGLAAAAFYVLLPPDPGT 294
             LA LVL      R    R H   LP          L++V+  LA  A +VL+      
Sbjct: 175 LALAYLVLCAVSRRRTLRWRDHELALPGGR-------LALVQ-ALAGGANWVLMGGIVWL 226

Query: 295 GYFG------FIGIWLVAVVAGLISTVPAGLGVFEWSLLKLLPHVTPAA-VLAAALAYRV 347
            + G       +G  L+A VAG+++ VPAGLGV E   +  L    P A VLA  LAYR 
Sbjct: 227 LFAGRVDFATVLGALLMAAVAGVVTHVPAGLGVLEAVFVATLSGALPTAEVLAVVLAYRA 286

Query: 348 TYYIVPLLISVAMAAATGLRAPVRASASTARTVWKTLRPWL 388
            YY++PL +++  A A    A  R      + V K  RP L
Sbjct: 287 AYYLLPLALALP-AYAWSEAAARRGGGKRRQGVEKASRPAL 326