Pairwise Alignments

Query, 583 a.a., DNA repair protein RecN from Xanthomonas campestris pv. campestris strain 8004

Subject, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

 Score =  446 bits (1147), Expect = e-129
 Identities = 255/554 (46%), Positives = 337/554 (60%), Gaps = 1/554 (0%)

Query: 30  MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 89
           ML HLSI ++A+V   +LE   GM+V++GETGAGKS+M+DALG   G RADSGVVR G D
Sbjct: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60

Query: 90  RAELSAEFQLPAEHPGLTWLADNELDDDAQCQLRRIIRADGGSRAWINGRPVTSSQLSDL 149
           +A++ A F L       TWLA+ +LD++  C LRR+I A+G SR +ING P     L  L
Sbjct: 61  KADILATFDLVDIPEAHTWLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKAL 120

Query: 150 AARLVEIHGQHEHQALMARNSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQG 209
              L++IH QHEHQ+L+  ++   LLD YA       QV+ A++RW     E + LS  G
Sbjct: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNSG 180

Query: 210 DVSD-RIGFLEHQLAELEREDLDPAAIAALDTNHRRQAHATALIGACESVVQQLNGDEGP 268
           D    R   L +QL EL+   L    +  L+  H+    A AL G C  V+ Q +  +  
Sbjct: 181 DEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDSG 240

Query: 269 SALGLLQDSRHDLARVAEHEPRLGEVDALLDSAAIQIEEALALLDRVRDDLDADPTQFEA 328
           + L  L  S + L         L E   L+ SA IQ+EEA+  L+R  D+ DADP + +A
Sbjct: 241 NVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRLQA 300

Query: 329 MERRLGRLHDLARKHRVSPDELAAHRDHLTAEVESLRGADERLQQLDKHIAAAIGVWQGA 388
           +E RL  ++ LARKHRV P EL   +  L  E+E L  +DE +++L + +AA    ++  
Sbjct: 301 LEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHYKEK 360

Query: 389 ASVLSASRQSAAQALSAATTTLIGELGMGGGQFLIQLQPQETLRPDPNGAERVEFLVAAN 448
           A  LS  RQ AAQ L+ A    I  LGM GG+F I+L   E     P+G E++E LV+AN
Sbjct: 361 ARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLVSAN 420

Query: 449 AGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRA 508
            GQP +AL KVASGGELSRISLAI+V       +PT+VFDEVD GIGG  A+IVGQ LR 
Sbjct: 421 PGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQLLRR 480

Query: 509 LGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQARQEELARMLGGVEV 568
           LGE  QVL VTHLPQVAA+GH H  V K      T +AV  LG + R EE+ARMLGG+++
Sbjct: 481 LGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGGIDL 540

Query: 569 SKEARAAARKLLQS 582
           +KE+ A ARK++ S
Sbjct: 541 TKESLAHARKMVVS 554