Pairwise Alignments

Query, 583 a.a., DNA repair protein RecN from Xanthomonas campestris pv. campestris strain 8004

Subject, 553 a.a., recombination and repair protein from Escherichia coli BL21

 Score =  360 bits (923), Expect = e-103
 Identities = 219/556 (39%), Positives = 313/556 (56%), Gaps = 10/556 (1%)

Query: 30  MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAD 89
           ML  L+I +FA+VR  E++F  GMTV++GETGAGKS+ +DALG   G RA++ +VR GA 
Sbjct: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60

Query: 90  RAELSAEFQLPAEHPGLTWLADNELDDDAQCQLRRIIRADGGSRAWINGRPVTSSQLSDL 149
           RA+L A F L      L WL +N+L+D  +C LRR+I +DG SR +ING  V  SQL +L
Sbjct: 61  RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL 120

Query: 150 AARLVEIHGQHEHQALMARNSQLALLDAYARNSAQREQVRQASQRW-QALLDERDALSAQ 208
              L++IHGQH HQ L     Q  LLD YA  ++  +++    Q W Q+  D        
Sbjct: 121 GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLS 180

Query: 209 GDVSDRIGFLEHQLAELEREDLDPAAIAALDTNHRRQAHATALIGACESVVQQLNGDEGP 268
            + + R   L++QL EL   +  P     +D  ++R A++  L+   ++ +  +   E  
Sbjct: 181 QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA 240

Query: 269 SALGLLQDSRHDLARVAEHEPRLGEVDALLDSAAIQIEEALALLDRVRDDLDADPTQFEA 328
           +    L  ++  ++ +   + +L  V  +L+ A IQI EA   L    D LD DP +   
Sbjct: 241 NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE 300

Query: 329 MERRLGRLHDLARKHRVSPDELAAHRDHLTAEVESLRGADERLQQL----DKHIAAAIGV 384
           +E+R+ +   LARKH VSP+ L  +   L  E + L    +  + L     KH   A+ +
Sbjct: 301 LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEI 360

Query: 385 WQGAASVLSASRQSAAQALSAATTTLIGELGMGGGQFLIQLQPQETLRPDPNGAERVEFL 444
               A  L   RQ  A+ L+   T  +  L M  GQF I ++  E      +GA+R+EF 
Sbjct: 361 ----ARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEH-HLGADGADRIEFR 415

Query: 445 VAANAGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQ 504
           V  N GQP + + KVASGGELSRI+LAI+V        P ++FDEVD GI G  A +VG+
Sbjct: 416 VTTNPGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGK 475

Query: 505 KLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQARQEELARMLG 564
            LR LGE  QV+CVTHLPQVA  GH HY VSK     MT++ ++ L  +AR +ELAR+LG
Sbjct: 476 LLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLG 535

Query: 565 GVEVSKEARAAARKLL 580
           G EV++   A A++LL
Sbjct: 536 GSEVTRNTLANAKELL 551