Pairwise Alignments

Query, 368 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  164 bits (415), Expect = 3e-45
 Identities = 118/344 (34%), Positives = 169/344 (49%), Gaps = 53/344 (15%)

Query: 5   RVGLIFGGKSAEHEVSLQSARNILQALDPQRFEPVLIGIDKQGQWHLSAQESFLLDADDP 64
           RV +++GGKSAE EVSL+S   ++ AL     + V I +                  DD 
Sbjct: 19  RVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDV-----------------GDD- 60

Query: 65  SRIALRHSGRGLAVLPGAASAQLRAVDAEQALAQIDVVFPIVHGTLGEDGSLQGLLRMAN 124
                                 L  + +E+    ID  F I+HG  GEDGS+QGLL    
Sbjct: 61  ---------------------LLARLQSEK----IDRAFIILHGRGGEDGSMQGLLECLG 95

Query: 125 LPFVGSGVLGSAVAMDKDMAKRVLRDAGLEVAPFACFTRHTAAQADVQTLIAQFGLPLFV 184
           +P+ GSG+L SA+AMDK   K+V +  G+     A      A+++D      + G PL V
Sbjct: 96  IPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVL----ASESDCLQASTELGFPLIV 151

Query: 185 KPANQGSSVGVSQVRSAEEFSAALELALRYDHKVLVEAAIAGREIECAVL-GNATPQASV 243
           KPA++GSS+G+++V S +E  AA + A +YD +VLVE  I G E   AVL G   P  ++
Sbjct: 152 KPAHEGSSIGMAKVNSTQELVAAWQDAAKYDSQVLVEQWIHGPEFTIAVLRGQVLPPIAL 211

Query: 244 CGEVVVHDAFYSYQTKYIRDDGAATVIPADIDAHTQHRIQQCALQAYQALDCAGMARVDV 303
               V    FY Y  KYI +D     IP  +D+  +  +     +A  A+   G  R+DV
Sbjct: 212 GTPHV----FYDYDAKYIVND-TQYRIPCGLDSVKEQELIDLTARACDAIGIEGWGRLDV 266

Query: 304 FLCADGRIVINEVNTLPGFTRISMYPKLWEASGLDYRSLVTRLI 347
                GR  + EVNT PG T  S+ P    A+GLD++ LV  ++
Sbjct: 267 MQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310