Pairwise Alignments

Query, 356 a.a., Nitrate ABC transporter, nitrate-binding protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 404 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Pseudomonas sp. SVBP6

 Score =  290 bits (743), Expect = 3e-83
 Identities = 156/354 (44%), Positives = 206/354 (58%), Gaps = 6/354 (1%)

Query: 5   ELPVLRVAYMPLIDCAPLVAASRLGLDHAYGLQLQLHRQASWAGVRDRLLAGEVDAAHTL 64
           E P L + +M L DCA +V A+  G   AYGL L L RQ+SWAG+RD+L +GE+DAAH+L
Sbjct: 20  EKPSLNLGFMALSDCASVVVAATQGFAQAYGLSLNLQRQSSWAGLRDKLASGELDAAHSL 79

Query: 65  ASLVYAIDLGVGGPQCP-MALLMTLNHNGQAITLAPALA-QGVAAGQPLPQVLAEAGRRV 122
             L+YA+ LG+GG     MA+LM LN NGQ I L  AL  QGV + + L + + ++  ++
Sbjct: 80  YGLIYALQLGIGGSAATDMAVLMGLNQNGQGINLCAALQRQGVTSPEALERFVHQSRTKL 139

Query: 123 VFAQTFPTGTHALWLYYWLAACGVDPMRDVDVVSIPPPQMPEALASGLVDGYCSGEPWAA 182
            FAQTFPTGTHA+WLYYWLA+ G+ P+ DV+ V +PP QM   L +G +DG+C GEPW+A
Sbjct: 140 TFAQTFPTGTHAMWLYYWLASQGIHPLHDVNSVVVPPAQMLAHLQAGRIDGFCVGEPWSA 199

Query: 183 VAEAQGSGQRVIRSGELWPEHPEKVLACRREFAALQPELSERLTACVLEACRWLDAAPAN 242
            A  QG G  +  S  +WP+HPEKVL C R F    P  +  L   VL A R+++    N
Sbjct: 200 GAIEQGQGFTLATSQSIWPDHPEKVLGCTRAFVEQYPNTARALVMAVLAASRFIEQNNEN 259

Query: 243 RAQCAQWLADPDYIGVPAAHLAACL----DADAATVSVDPSALAFHRGGAVNMPWLSDGE 298
           R   AQ L+   Y+  P + +   L             DP AL  H  G  N+P+LSDG 
Sbjct: 260 RRSTAQLLSGKAYLDAPLSSIEPRLLGQYQDGLGNQWHDPHALRLHDEGRANVPYLSDGM 319

Query: 299 WFLEQFQRWGWHTLQAADLARLHDIHRLDNYRRAAQRAGVTAPDADRRINRLFD 352
           WF+ QF+RWG        LA    + +L  YR AA   GV     D R + L D
Sbjct: 320 WFMTQFRRWGLLREDPDYLAVARQVQQLALYRDAATAIGVPCAGPDMRSSPLID 373