Pairwise Alignments

Query, 446 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Xanthomonas campestris pv. campestris strain 8004

Subject, 456 a.a., exonuclease VII, large subunit from Escherichia coli BL21

 Score =  347 bits (890), Expect = e-100
 Identities = 188/436 (43%), Positives = 273/436 (62%), Gaps = 3/436 (0%)

Query: 1   MADRTEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVTRPASGHLYFTLKDARAQIRCA 60
           +  ++  I T S+LN   R LLE     VW+  E+ N T+PASGH YFTLKD  AQ+RCA
Sbjct: 2   LPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCA 61

Query: 61  MFKPKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARL 120
           MF+  +  + F+P+ G +VL R  +TLYE RGDYQ++++ M+ AGEG L++ +E+L+A+L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 121 AAEGVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSA 180
            AEG+FD + K+PLP+    + VITS +GAA+ D+L VL RR P L V I P+ VQGD A
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181

Query: 181 AAQITSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGHETD 240
             QI   ++ A+     DV+++ RGGGSLEDLW+FNDER+ARAI  +  PVVSAVGHETD
Sbjct: 182 PGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETD 241

Query: 241 VSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQLQQHTLGQAMQHADRLAL 300
           V+++DF AD+RAPTPS AAE++  +Q+EL+ +V+  + RL     + L    +   ++  
Sbjct: 242 VTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHH 301

Query: 301 RLRARSPQARLQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQRHLAPLQ 360
           RL+ + PQ RL   Q   E   + +   +++ L+R   + QR    +   +PQ  +   Q
Sbjct: 302 RLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQ 361

Query: 361 QRLRAAHPQAAMQRRLQQDHLHLR--GLVRSLEAVSPLATVARGYAIVTRQADGSVVRSA 418
            R++    + A   R Q      R    V  LEAVSPL+T+ARGY+ VT   DG+V++  
Sbjct: 362 TRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYS-VTTATDGNVLKKV 420

Query: 419 AELTQGDRLRAQLADG 434
            ++  G+ L  +L DG
Sbjct: 421 KQVKAGEMLTTRLEDG 436