Pairwise Alignments

Query, 436 a.a., RND efflux system, membrane fusion protein CmeA from Xanthomonas campestris pv. campestris strain 8004

Subject, 395 a.a., RND efflux system, membrane fusion protein CmeA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  299 bits (766), Expect = 9e-86
 Identities = 168/393 (42%), Positives = 230/393 (58%), Gaps = 13/393 (3%)

Query: 13  AITVALAACSKPEQQQAP------PPPEVSVLEMKPQTLPLERDLVGRLSAFRSADVRAR 66
           A+ VALAAC +    QA       P PEV V+ + P  + L  +L GRL A R A VRAR
Sbjct: 5   ALAVALAACGESAPPQAAAAGGGMPAPEVGVVTVTPGDVGLTTELPGRLEASRVAQVRAR 64

Query: 67  VDGVLLKRLYTEGTDVKEGQPLFEIDPMPLRATLLQAQGQLAAAEATYANAKIAAQRARS 126
             G+L +RL+ EG+DVK GQ LF IDP P  A    AQ  LA ++A    A   A+R   
Sbjct: 65  AAGILQERLFREGSDVKAGQALFRIDPAPYAAAQQSAQASLARSQANLTQATALAERYAP 124

Query: 127 LAPQQYVSRADIDTAEATERSSGASVQQARGVVESASIQLSFASVTSPITGRAGIQRVTE 186
           L  +  +S+ +   A A ++ + A V   +  V++A+I L +A VT+PI+GR G   VTE
Sbjct: 125 LVKENAISQQEYANAVAAQKQAEADVAAGKAAVQTANINLGYARVTAPISGRIGRALVTE 184

Query: 187 GALVGSGEATLLTTVDQIDPLYVNFAMSSEELAALRQAQSSGNVQLSGDGKSTINVELGN 246
           GALVG GEAT L  + QI+P+YVNF  S+ E+  LR+A  SG ++ +G   +++ V L +
Sbjct: 185 GALVGQGEATQLAVIQQINPMYVNFTQSAAEVFKLRKAMESGQLKGAGSQAASVQVVLED 244

Query: 247 GTQYPHPGTLDVSAVTVDPSTGAVSLRATLPNPEMALLPGAFVTFKASLGQRNNAYLVPQ 306
           G+ Y  PG L  S +TVD STG V+LRA +PNP+  LLPG +V  +    +  NA  +PQ
Sbjct: 245 GSVYEQPGRLLFSDLTVDSSTGQVTLRAEVPNPKGTLLPGLYVRVRLEQAKAGNAITLPQ 304

Query: 307 QALQRDATGAYALVLGKDGKVVRKNLTVDGQQKGQWIVTAGMAPGDQVIVDGVQKAK--- 363
           QA+ R A G    V+G DGK+  + + V GQQ GQW++  G+  G+Q++VDG QK +   
Sbjct: 305 QAVTRSAQGDTVSVVGADGKISPRQVKVGGQQNGQWVILDGVKAGEQIMVDGFQKLQMMP 364

Query: 364 EGQPAKGVPWDPNKPAQGGQPGAPGAAPAGGQA 396
            G P K VPW     A G  P AP AA    +A
Sbjct: 365 PGTPVKAVPWQ----ASGSAPAAPAAAAPAPEA 393