Pairwise Alignments

Query, 436 a.a., RND efflux system, membrane fusion protein CmeA from Xanthomonas campestris pv. campestris strain 8004

Subject, 385 a.a., cytoplasmic membrane lipoprotein from Escherichia coli BL21

 Score =  253 bits (645), Expect = 9e-72
 Identities = 143/360 (39%), Positives = 214/360 (59%), Gaps = 3/360 (0%)

Query: 18  LAACS-KPEQQQAPPPPEVSVLEMKPQTLPLERDLVGRLSAFRSADVRARVDGVLLKRLY 76
           +A C+ K E++     P+V+V  +K   L ++ +L GR +A+R A+VR +V G++L R +
Sbjct: 21  IAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNF 80

Query: 77  TEGTDVKEGQPLFEIDPMPLRATLLQAQGQLAAAEATYANAKIAAQRARSLAPQQYVSRA 136
           TEG+DV+ GQ L++IDP   +A    A+G+LA +EA  A A +  +R   L   +Y+S+ 
Sbjct: 81  TEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQ 140

Query: 137 DIDTAEATERSSGASVQQARGVVESASIQLSFASVTSPITGRAGIQRVTEGALVGSGEAT 196
           + D A A  R + A+V  A+  VESA I L++  VT+PI+GR G   VTEGALV +G+ T
Sbjct: 141 EYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTT 200

Query: 197 LLTTVDQIDPLYVNFAMSSEELAALRQAQSSGNVQLSGDGKSTINVELGNGTQYPHPGTL 256
            L TV Q+DP+YV+   SS +   L+Q+   GN+    +  S + + + NG  YP  GTL
Sbjct: 201 ELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLH-KENATSNVELVMENGQTYPLKGTL 259

Query: 257 DVSAVTVDPSTGAVSLRATLPNPEMALLPGAFVTFKASLGQRNNAYLVPQQALQRDATGA 316
             S VTVD STG+++LRA  PNP+  LLPG FV  +   G + +A L+PQQ + R   G 
Sbjct: 260 QFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGD 319

Query: 317 YALVLGKDGKVVRKNLTVDGQQKG-QWIVTAGMAPGDQVIVDGVQKAKEGQPAKGVPWDP 375
             +++  D   V     V  Q  G +W+++  +  GDQVIV G+QKA+ G+  K     P
Sbjct: 320 ATVLIVNDKSQVEARPVVASQAIGDKWLISEALKSGDQVIVSGLQKARPGEQVKATTDTP 379