Pairwise Alignments

Query, 352 a.a., Ribose operon repressor from Xanthomonas campestris pv. campestris strain 8004

Subject, 330 a.a., ribose operon transcriptional repressor RbsR from Escherichia coli ECRC102

 Score =  153 bits (387), Expect = 5e-42
 Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 11/319 (3%)

Query: 19  VATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSF 78
           +AT+ D+AR++GVS  TVS +IN    V +    KVEA ++E+ YAP  LAR L   ++ 
Sbjct: 1   LATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 79  LIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIEGVRRFAQAQKLHGV 138
            IGM+    T  +  ++  G   +     + LV+   +         +    Q +++ G+
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQ-KRVDGL 119

Query: 139 ILVPRASEDQALADMLAEIGCRYTRIASIALDTT-----SQTVITHDRDGAAEAADYLLS 193
           +L+   +   +      EI  RY  + ++ +D       S  +  +   G   A  YL+ 
Sbjct: 120 LLLCTETHQPS-----REIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLID 174

Query: 194 LGHRDIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYTFESGVAAAEKLLL 253
            GH  IA +TGP     +  R  G+  A+ R G+ +P    V   + F  G  A  +LL 
Sbjct: 175 KGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLS 234

Query: 254 GKKRPTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASRLWPPLTSVRRHTR 313
              RP A+FTGND MA G+Y+   +A + +P+ ++VIGYDD  LAS + PPLT++ +   
Sbjct: 235 HPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKD 294

Query: 314 DTGRTAAAMLIQPDNAPQL 332
           + G  A  +LI     P L
Sbjct: 295 ELGELAIDVLIHRITQPTL 313