Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 284 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  136 bits (343), Expect = 4e-37
 Identities = 84/249 (33%), Positives = 137/249 (55%), Gaps = 16/249 (6%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           L   GL   +   + + +    ++ G +  L+GPNGAGKT+ F  I G     AG I LD
Sbjct: 18  LAVDGLGLWFGGLKALTDVSFEVKPGTITALIGPNGAGKTSLFNCISGFYRPRAGSIRLD 77

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRL--VLELRDDL--------DGPG 111
           G D+T      RAK G+    Q  ++F+ ++V DNI+L     ++ +L            
Sbjct: 78  GADITRTHPPERAKAGLARTFQNIALFKGMTVLDNIKLGRHAHMKTNLLQALTYWGAARA 137

Query: 112 QEKELAS-----LLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGV 166
           +E EL +     +++ L+I H+ ++  ASLS G ++R E+ARALA +PR+++LDEP AG+
Sbjct: 138 EEMELRAEVERQIIDFLEIDHIRNKPVASLSYGLQKRVELARALAMRPRLLMLDEPVAGM 197

Query: 167 DPISVGEIQRIVIHLKER-GIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNN 225
           +     ++ R ++ +KE  GI +L+ +H++   + I D   +L  G V+AQG P  +  N
Sbjct: 198 NREETEDMARFILDVKEEWGISILMVEHDMAMVMDISDHVVVLNFGKVIAQGLPAEVQGN 257

Query: 226 PDVRRVYLG 234
           P+V   YLG
Sbjct: 258 PEVAAAYLG 266