Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 235 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  139 bits (349), Expect = 6e-38
 Identities = 80/232 (34%), Positives = 130/232 (56%), Gaps = 2/232 (0%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           ML    L   Y    VV +    +E GE+V L+G NGAGKT+    ++GL+    GR+  
Sbjct: 3   MLEVEKLSAWYGPSHVVHDLTFKIEQGEIVALVGRNGAGKTSTLRAVMGLMPRAEGRVTF 62

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120
           DG DL     +AR +LG+GY+P++  +   L+V +N++L L      D      E+A   
Sbjct: 63  DGTDLLPLGAHARFRLGLGYVPEDRRIVPGLTVRENLQLGLVAAGRTDERAAIDEIAKSF 122

Query: 121 EELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIH 180
             L+     +Q G ++SGGE++   IARA+ +KP+M+LLDEP  G+ P+ V E+  +   
Sbjct: 123 PRLK--ERLEQQGTTMSGGEQQMLAIARAIISKPKMVLLDEPSEGIMPVLVEEMGVLFRR 180

Query: 181 LKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVY 232
           L+++G  +L+ + NV   L +  RA I+ +G ++ Q +  ALL + D++  Y
Sbjct: 181 LRDQGTTLLLVEQNVEWALNLASRAIIIDQGELVHQSSAAALLADKDIQDRY 232