Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 264 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Variovorax sp. SCN45

 Score =  295 bits (756), Expect = 5e-85
 Identities = 149/247 (60%), Positives = 189/247 (76%), Gaps = 9/247 (3%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           LVA GL+K Y  R VVK+  L ++ GEVVGLLGPNGAGKTT FYMIVGLV ADAG I +D
Sbjct: 18  LVARGLKKSYGSRTVVKDVSLDVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAGDITID 77

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQ--------- 112
           G  +   P++ RA++G+ YLPQE S+FRKL+V +N+R VLEL+ + D  G+         
Sbjct: 78  GEPIAHMPIHRRARMGLSYLPQEASIFRKLTVEENVRAVLELQQEPDASGKLMPLSKQHM 137

Query: 113 EKELASLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVG 172
           E+ L+ LL +L++ H+ D    +LSGGERRR EIARALA +PR +LLDEPFAG+DPI+V 
Sbjct: 138 EERLSELLADLRVDHLRDSPALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVI 197

Query: 173 EIQRIVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVY 232
           EIQRI+  LKERGIGVLITDHNVRETLGICD A+I+++G VLAQG P  +++N +VRRVY
Sbjct: 198 EIQRIISFLKERGIGVLITDHNVRETLGICDHAFIISDGHVLAQGTPSEIVDNAEVRRVY 257

Query: 233 LGDTFRL 239
           LG+ FR+
Sbjct: 258 LGEHFRM 264