Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 258 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  139 bits (351), Expect = 4e-38
 Identities = 78/240 (32%), Positives = 129/240 (53%), Gaps = 11/240 (4%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           +L   GL+  Y   + VK     +  GE+V L+G NGAGKTT    I G + A AG IE 
Sbjct: 25  LLKVNGLKVGYGGIQAVKGVDFEVREGELVSLIGSNGAGKTTTMKAITGTLPAGAGNIEF 84

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120
            GR +     +     G+  +P+   VF ++++ +N+++   +R D      + E+A  +
Sbjct: 85  LGRSIKGRGAWDLVSEGLVMVPEGRGVFTRMTITENLQIGAYIRKD------KAEIAKDM 138

Query: 121 EELQITHVA-----DQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQ 175
           E + +T        DQL  ++SGGE++   + RAL A+P+++LLDEP  G+ PI   +I 
Sbjct: 139 ERVFVTFPRLRERKDQLAGTMSGGEQQMLAMGRALMARPKVLLLDEPTMGLSPIMCDKIF 198

Query: 176 RIVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGD 235
            +V  +  +G+ +L+ + N    L + DR Y++  G +   G   ALL++P VR  YLG+
Sbjct: 199 EVVQTVASQGVTILLVEQNANRALQLADRGYVMESGLITMSGEAKALLSDPRVRAAYLGE 258