Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 236 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 3e-39
 Identities = 87/237 (36%), Positives = 129/237 (54%), Gaps = 6/237 (2%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           ML    ++  Y   E VK   L + AGEVV ++G NGAGK+T    IVGL     GR+ +
Sbjct: 1   MLKIESVKVSYGAIEAVKGVSLEVRAGEVVTIIGANGAGKSTLLKSIVGLEPVAEGRVLI 60

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRL-VLELRDD--LDGPGQEKELA 117
           DG D T  P + R  LGV   P+   VF   +V +N+ L     R+D        E+E A
Sbjct: 61  DGNDCTHVPSHKRVGLGVALSPEGRGVFPDQTVRENLMLGAYSRRNDKAFVENAIEREFA 120

Query: 118 SLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRI 177
                 +  H   Q   +LSGGE++   IARAL ++PR++LLDEP  G+ P+ + +I   
Sbjct: 121 RFPRLKERQH---QPSGTLSGGEQQMLAIARALMSEPRLLLLDEPSLGLAPLIIKDIFDA 177

Query: 178 VIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLG 234
           +  L+  G+ +L+ +   ++ LG+ DRAY+L  G +  +G+   LL+NP V+  YLG
Sbjct: 178 IRQLRSSGLTILLVEQMAKQALGVADRAYVLETGCITLEGSGRELLDNPKVKSAYLG 234