Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 236 a.a., ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  149 bits (376), Expect = 5e-41
 Identities = 88/238 (36%), Positives = 140/238 (58%), Gaps = 10/238 (4%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           +L   GLR  Y + EV++   L ++AGE+V LLG NGAGK+T   M+ GL  A +G +  
Sbjct: 4   LLDIQGLRGGYGRVEVLRGVDLRVDAGEMVALLGSNGAGKSTLNKMVCGLCPAWSGTVRF 63

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120
           DG+DL+        K G+  +P+   +F  LSV +N+ L    R       +E+  A++ 
Sbjct: 64  DGKDLSGAHYRDVVKAGLIQVPEGRKIFPNLSVLENLELGSFTR------ARERRAANVE 117

Query: 121 EELQI-THVADQLG---ASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQR 176
           +   I   + +++G    ++SGGE++   IAR L A+P +++LDEP  G+ P+ V E+  
Sbjct: 118 KMFHIFPRLRERVGQHAGTMSGGEQQMLAIARGLMAEPVLLILDEPSLGLSPLLVEEMFS 177

Query: 177 IVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLG 234
           ++  L++ G+ VL+ + NV ++L I DRAY+L  G V   G PDALL + ++RR YLG
Sbjct: 178 LIRELRDGGLAVLLVEQNVGQSLEIADRAYVLENGSVRFSGKPDALLGSDELRRAYLG 235