Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 247 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Methylophilus sp. DMC18

 Score =  271 bits (694), Expect = 7e-78
 Identities = 139/233 (59%), Positives = 170/233 (72%), Gaps = 1/233 (0%)

Query: 7   LRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELDGRDLT 66
           L+K Y+ R VVK   L L +GEV+GLLGPNGAGKTT FYMIVGLV  D G I L+G D++
Sbjct: 16  LKKTYQGRTVVKNTTLELRSGEVIGLLGPNGAGKTTSFYMIVGLVALDEGNITLNGADVS 75

Query: 67  AEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLLEELQIT 126
             PM+ RA++G+ YLPQE S+FRKLSV DNI  +LE R   +   +E  L SLL++L I 
Sbjct: 76  RAPMHERARMGLAYLPQEASIFRKLSVTDNILAILETRPYTEEQ-REARLESLLDQLHIQ 134

Query: 127 HVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHLKERGI 186
           H+ +    SLSGGERRR EIAR LA  P+ +LLDEPFAG+DPI+V EIQ+I+ +L  + I
Sbjct: 135 HIRNSQAVSLSGGERRRVEIARCLATDPKFILLDEPFAGIDPIAVIEIQKIIRYLSSQNI 194

Query: 187 GVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239
           G+LITDHNVRETL ICDRAYI+ EG V A G PD ++ N  VR VYLG  FRL
Sbjct: 195 GILITDHNVRETLDICDRAYIVNEGAVFAAGTPDEIIQNEGVREVYLGKNFRL 247