Pairwise Alignments

Query, 415 a.a., Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) from Xanthomonas campestris pv. campestris strain 8004

Subject, 452 a.a., Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 62/321 (19%), Positives = 128/321 (39%), Gaps = 46/321 (14%)

Query: 119 HWLNGSVETWKNYAASSRKDPN-------ITRENVCDFPVILPTLGEQRRIAHILSTWDQ 171
           HWL   V+T K++  +   + +       +T+E + ++ V +P L EQ+ IA  L T   
Sbjct: 98  HWLFALVKT-KDFLTNGALNMSGSVGHKRVTKEFLENYGVPVPPLAEQKVIAEKLDTLLA 156

Query: 172 AIATTERLLK------------------NSQKQMDILLRDLTLGTQRTTSTPSPWAKFTL 213
            + +T+  L+                  N Q   ++  ++    T+   S PS W    +
Sbjct: 157 QVDSTKARLEQIPQILKRFRQSVIVAAVNGQLTKELHKKNKFKLTELNISIPSLWKISEI 216

Query: 214 GELGRTYSGLSGKKGEDFGFGAKFIPYT--------NVFKNNRIDIEDFSLVKISENENQ 265
           G+      G    KGE         PY          V    ++ +E++    I ++ ++
Sbjct: 217 GQFADVKGGKRLPKGESLIAENTGFPYIRAGQLKNGTVLPEGQLYLEEY----IQKSISR 272

Query: 266 TRVKSGDIIFTISSETPNEVGMASVLLDDVNELYLNSFCFGYRLNDFKTLLPEYAGFVLR 325
             V SGD+  TI       +G A ++ D  N   L         N  + +   +    LR
Sbjct: 273 YTVSSGDLYITIVGAC---IGDAGIIPDVYNNANLTENA-AKICNLNENIFNRFLSLWLR 328

Query: 326 APHIRALMTQIAQGSTRFNISKANVMRMELALPSIAEQ----KRIASILGGAHSTVKNLR 381
           + +++ ++    +   +  ++ A +  + L LP + EQ    +R+  +   A +  K + 
Sbjct: 329 SSYLQDIINSEIKSGAQGKLALARIKSLPLILPPLQEQHEIVRRVEQLFAYADTIEKQVN 388

Query: 382 DQLARLKAEKVILMSQLLTGK 402
           + L R+ +    ++++   G+
Sbjct: 389 NALTRVNSLTQSILAKAFRGE 409