Pairwise Alignments

Query, 346 a.a., Holliday junction DNA helicase RuvB from Xanthomonas campestris pv. campestris strain 8004

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  459 bits (1182), Expect = e-134
 Identities = 228/340 (67%), Positives = 282/340 (82%), Gaps = 4/340 (1%)

Query: 5   RTIASSATREDEAADASIRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIFGPPG 64
           R IA+S    +E  D +IRP  L +Y+GQ  VR+QM ++IQAA+ RGE++DH LIFGPPG
Sbjct: 6   RLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFGPPG 65

Query: 65  LGKTTLSHVIANELGVNLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVEEV 124
           LGKTTL+++IA+E+GV+++ TSGP++E+ GDLAA+LTNL+PHDVLFIDEIHRLSPVVEEV
Sbjct: 66  LGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEV 125

Query: 125 LYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEFYS 184
           LYPAMEDFQ+DIMIG+GPAARSIK+DLPPFTL+GATTRAG+LT PLRDRFGIVQRLEFY+
Sbjct: 126 LYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYN 185

Query: 185 PQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGHIDLA 244
            ++L+ IV RSA ILG+     GA EIARRARGTPRIANRLLRRVRD+A+V+  G I  A
Sbjct: 186 DKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKA 245

Query: 245 VAQAAMQMLKVDPEGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVIEPYL 304
           VA  A+ +L VD  GFD  DRR+L T+++ FDGGPVGV++LAA++SEER T+EDV+EPYL
Sbjct: 246 VADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLEPYL 305

Query: 305 IQQGFLIRTARGRMVTPKAYLHLGLKPPRDRAPAIGEPGD 344
           IQQG+++RT RGR+VT  AYLH GL  P      +GE GD
Sbjct: 306 IQQGYIMRTPRGRVVTRHAYLHFGLNIP----GRLGEGGD 341