Pairwise Alignments

Query, 331 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  337 bits (864), Expect = 2e-97
 Identities = 164/306 (53%), Positives = 217/306 (70%)

Query: 16  AVVPDSAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDGETARPRDTLRGGETVQVQV 75
           A VP    G+R D V A+LF E+SRSRL+ WIK G   +DG   RPRD + GG  + ++ 
Sbjct: 9   AEVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSQLALEA 68

Query: 76  VLETQTHAAPQDIPLNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNALLFRDPNLAAV 135
             E Q     +DI L+++YEDDH+LVI+KPAGLVVHP AG+  GTL+NALL   P++  V
Sbjct: 69  EQEAQGEWIAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALLHHVPDIVNV 128

Query: 136 PRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSARDVHRQYLAVVVGALVSGGTADAPI 195
           PRAG+VHRLDKDT+G+MVVA+TLQAQT LVEQ+ AR V R Y  +V+G + +GG  DAPI
Sbjct: 129 PRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVTAGGKIDAPI 188

Query: 196 DRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECRLETGRTHQIRVHMAHLKSPIVG 255
            RH   R +MAV D G+ AV+HYR+ +RFR+HT +  +LETGRTHQIRVHMAH+  P+VG
Sbjct: 189 GRHGGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHMAHVGFPLVG 248

Query: 256 DPLYGGALKLPKGATDTLVAELRGFKRQALHAETLEFLHPVSGEPIRASAPVPEDLQRLM 315
           D  YGG  ++P  A+ T+V  ++ F RQALHA  L   HP++GE ++  +P+P+D   L+
Sbjct: 249 DQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWESPLPDDFVWLL 308

Query: 316 SALRED 321
           S L +D
Sbjct: 309 SLLNQD 314