Pairwise Alignments

Query, 331 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 336 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  221 bits (564), Expect = 2e-62
 Identities = 139/311 (44%), Positives = 178/311 (57%), Gaps = 21/311 (6%)

Query: 14  RQAVVPDSAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDGETAR-PRDTLRGGETVQ 72
           R   VP    G R D  LA+L PEFSRS L + +  G   + G   R P   +  G+ + 
Sbjct: 22  RVCEVPADMHGWRIDRALAQLIPEFSRSYLQQLMVDGAVEMRGTALRKPSARIAAGDRLA 81

Query: 73  VQVVLETQTHA-APQDIPLNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNALLFRDPN 131
           V++    Q  A  PQ + L+V+YED  +LVI KPAGLVVHP AG+  GTL+N LL     
Sbjct: 82  VELRPTQQAQAFVPQAMALDVVYEDADLLVIQKPAGLVVHPAAGHWTGTLLNGLLAHHAG 141

Query: 132 LAAVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSARDVHRQYLAVVVGALVSGGT- 190
            A++PRAG+VHRLDKDTSG+M+V ++ QA  ALV  ++AR+V+RQYLA+  G        
Sbjct: 142 AASLPRAGIVHRLDKDTSGLMLVGKSRQAVEALVRAIAAREVNRQYLALAHGRWQGAAEK 201

Query: 191 -ADAPIDRHPRDRLKMA-VRDD---GRDAVTHYRLRERFRAHTALECRLETGRTHQIRVH 245
             D PI R   +RL+MA VR D   G+ A T  RL +       + C+L TGRTHQIRVH
Sbjct: 202 GVDQPIGRDVHNRLRMAVVRPDTGIGKAAQTTIRLLDTSDQACLVACKLHTGRTHQIRVH 261

Query: 246 MAHLKSPIVGDPLYGGALKLPKGATDTLVAELRGFKRQALHAETLEFLHPVSGEPIRASA 305
           MA L  P+V D LYGG               L G  RQALHA  L   HP++GEP+   +
Sbjct: 262 MAWLGHPLVADTLYGG-------------RALWGIDRQALHAARLSLRHPITGEPLAFRS 308

Query: 306 PVPEDLQRLMS 316
           P P DL   M+
Sbjct: 309 PPPPDLLAAMA 319