Pairwise Alignments

Query, 331 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 326 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  337 bits (863), Expect = 3e-97
 Identities = 163/307 (53%), Positives = 219/307 (71%), Gaps = 1/307 (0%)

Query: 16  AVVPDSAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDGETA-RPRDTLRGGETVQVQ 74
           A V ++  G+R D  LAE+FP++SRSR+ EWI +   L++G+   +P++ + GGE V + 
Sbjct: 9   ATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVLGGERVAID 68

Query: 75  VVLETQTHAAPQDIPLNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNALLFRDPNLAA 134
             ++ +     QDIPL+++YEDD +LVI+KP  LVVHPGAGNPDGT++NALL   P +A 
Sbjct: 69  AEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIAD 128

Query: 135 VPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSARDVHRQYLAVVVGALVSGGTADAP 194
           VPRAG+VHRLDKDT+G+MVVA+T+ AQT LVE L  R++ R+Y AV +G + +GGT + P
Sbjct: 129 VPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMTAGGTVNEP 188

Query: 195 IDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECRLETGRTHQIRVHMAHLKSPIV 254
           I RHP  R  M+V   G+ AVTHYR+ E FR HT L  RLETGRTHQIRVHMAH+  P+V
Sbjct: 189 ISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLV 248

Query: 255 GDPLYGGALKLPKGATDTLVAELRGFKRQALHAETLEFLHPVSGEPIRASAPVPEDLQRL 314
           GD +YGG  + PKGA++  ++ LR F RQALHA  L   HPVSG  +   AP+P+D+  L
Sbjct: 249 GDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHAPIPQDMVDL 308

Query: 315 MSALRED 321
           + A+R D
Sbjct: 309 IDAMRAD 315