Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (304), Expect = 2e-32
 Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 11/243 (4%)

Query: 146 ILETFARG--------IFRPKRWRITPM-VAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 196
           + ETF R         + RP+  R  P+ V  +   G+ +  I+ +    +G V++  G 
Sbjct: 14  VSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGY 73

Query: 197 TVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRTL 256
            +L  +GA      +VA S LRE G ++TA+L AGR  SA TA+IG MKA E++ ++  +
Sbjct: 74  VILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMM 133

Query: 257 GLDPMELLVLPRVLALLVSLPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIGV 316
            +DP++ ++ PR  A ++S+P+L  + M  GI GG +V      I    F S +Q+ + +
Sbjct: 134 AVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVEL 193

Query: 317 -QHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLD-ALAA 374
            Q      +K  +FAF +  I    G+    ++E +   TT +VV S   V+ LD  L A
Sbjct: 194 GQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTA 253

Query: 375 LFF 377
           L F
Sbjct: 254 LMF 256